CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 4
peroxisome 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002024_P002	Maize	endoplasmic reticulum, peroxisome, plastid	96.11	94.88
Os04t0653400-01	Rice	plasma membrane	89.19	89.06
TraesCS2D01G506600.1	Wheat	endoplasmic reticulum	88.18	88.44
HORVU2Hr1G040900.1	Barley	cytosol	8.07	87.5
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	87.9	87.14
TraesCS2B01G534200.1	Wheat	endoplasmic reticulum	86.74	86.99
HORVU2Hr1G074570.1	Barley	cytosol	5.91	85.42
HORVU2Hr1G074590.1	Barley	cytosol	5.48	84.44
EER99347	Sorghum	endoplasmic reticulum, peroxisome, plastid	74.06	72.8
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	72.77	71.63
EES13592	Sorghum	cytosol, peroxisome, plastid	71.61	70.4
KRH02867	Soybean	endoplasmic reticulum	70.46	69.17
KRH19026	Soybean	mitochondrion	70.32	69.02
CDY14183	Canola	cytosol, peroxisome, plastid	68.01	67.82
CDY28169	Canola	plastid	67.72	67.53
PGSC0003DMT400035801	Potato	plastid	69.45	67.41
Solyc07g019460.2.1	Tomato	cytosol	69.31	67.27
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	68.44	67.19
CDY51656	Canola	plastid	68.3	67.14
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	68.3	66.95
CDX68634	Canola	plastid	68.59	66.85
CDY03543	Canola	plastid	68.01	66.48
Bra011174.1-P	Field mustard	cytosol, plastid	64.27	66.37
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	63.69	66.17
AT4G30210.3	Thale cress	plastid	68.16	61.11
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	24.5	26.77
CDY34997	Canola	mitochondrion	8.36	26.73
Bra021223.1-P	Field mustard	mitochondrion	7.93	25.82

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	EntrezGene:8068503
UniProt:C5Y9G6	EnsemblPlants:EES11568	ProteinID:EES11568	ProteinID:EES11568.1	InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha
InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208
PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF107
InterPro:Riboflavin_synthase-like_b-brl	EnsemblPlantsGene:SORBI_3006G245400	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	unigene:Sbi.3863
TMHMM:TMhelix	UniParc:UPI0001A86E3A	RefSeq:XP_002447240.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:58495006..58503447

Molecular Weight (calculated)

76364.4 Da

IEP (calculated)

4.828

GRAVY (calculated)

-0.238

Length

694 amino acids

Sequence
(BLAST)

001: MAALEAARSW AGSVIPPELA AAAGGDPLAA LAATAAALVA GLLILAVWFR SGGGAPSKPV AAPVRPPPVK VDADADVDDG RKRVTIFFGT QTGTAEGFAK
101: SMAEEARARY EKAVFKVVDL DDYAQEDEEY EEKLKKETVV LFFLATYGDG EPTDNAARFY KWFTEGKEKE VWLKALKYGI FGLGNRQYEH FNKVAKVVDE
201: LLEEQGGKRL VPVGLGDDDQ CIEDDFTAWK ELVWPELDQL LRDEDDTTGA STPYTAAIPE YRVVFIDKSD LSFQDRSWTL ANGTGVIDIQ HPCRANVAVR
301: KELHKPASDR SCIHLEFDIS GTGLVYETGD HVGVYAENSV ETVEEAERLL DLSPDTFFSI HADAEDGSPR KGGGSLAPPF PSPCTLRTAL LRYADLLNPP
401: KKAALLALAS HASDPAEAER LRFLASPAGK DEYSQWITAS QRSLIEVMAA FPSAKPPLGV FFAAIAPRLQ PRYYSISSSP MMAPSRIHVT CALVYGPSPT
501: GRIHQGVCST WMKNTIPLEY SEESSWAPIF VRQSNFKLPA DPSTPIIMIG PGTGLAPFRG FLQERLALKQ SGTELGTSIL FFGCRNRNMD YIYEDELQTF
601: LEEGALSELI IAFSREGPTK EYVQHKMVEK ATEIWNIISH GGYLYVCGDA KGMARDVHRM LHTIVQEQGS LDSSKTESYV KSLQMEGRYL RDVW

Best Arabidopsis Sequence Match ( AT4G30210.3 )
(BLAST)

001: MKNMMNYKLK LCSVSKNSKG VSLSPTPHLT KPPTIHTERD LLLPSSSFFF LLLSSSSYNI YNAMSSSSSS STSMIDLMAA IIKGEPVIVS DPANASAYES
101: VAAELSSMLI ENRQFAMIVT TSIAVLIGCI VMLVWRRSGS GNSKRVEPLK PLVIKPREEE IDDGRKKVTI FFGTQTGTAE GFAKALGEEA KARYEKTRFK
201: IVDLDDYAAD DDEYEEKLKK EDVAFFFLAT YGDGEPTDNA ARFYKWFTEG NDRGEWLKNL KYGVFGLGNR QYEHFNKVAK VVDDILVEQG AQRLVQVGLG
301: DDDQCIEDDF TAWREALWPE LDTILREEGD TAVATPYTAA VLEYRVSIHD SEDAKFNDIN MANGNGYTVF DAQHPYKANV AVKRELHTPE SDRSCIHLEF
401: DIAGSGLTYE TGDHVGVLCD NLSETVDEAL RLLDMSPDTY FSLHAEKEDG TPISSSLPPP FPPCNLRTAL TRYACLLSSP KKSALVALAA HASDPTEAER
501: LKHLASPAGK DEYSKWVVES QRSLLEVMAE FPSAKPPLGV FFAGVAPRLQ PRFYSISSSP KIAETRIHVT CALVYEKMPT GRIHKGVCST WMKNAVPYEK
601: SENCSSAPIF VRQSNFKLPS DSKVPIIMIG PGTGLAPFRG FLQERLALVE SGVELGPSVL FFGCRNRRMD FIYEEELQRF VESGALAELS VAFSREGPTK
701: EYVQHKMMDK ASDIWNMISQ GAYLYVCGDA KGMARDVHRS LHTIAQEQGS MDSTKAEGFV KNLQTSGRYL RDVW

Arabidopsis Description

ATR2P450 reductase 2 [Source:TAIR;Acc:AT4G30210]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.