CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01775	Soybean	cytosol, mitochondrion	71.23	40.13
Solyc02g085820.2.1	Tomato	cytosol	56.98	31.75
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	56.98	31.75
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	55.84	31.01
Os01t0733600-01	Rice	cytosol	50.43	28.27
AT3G02280.2	Thale cress	mitochondrion	50.14	28.25
Bra001039.1-P	Field mustard	cytosol, mitochondrion	49.57	28.06
HORVU3Hr1G069620.2	Barley	plasma membrane	50.14	27.98
CDX74264	Canola	mitochondrion	49.29	27.86
CDX91986	Canola	mitochondrion	49.29	27.68
TraesCS3D01G280300.1	Wheat	plastid	49.57	27.44
TraesCS3B01G314200.1	Wheat	cytosol	49.29	27.42
TraesCS3A01G280500.2	Wheat	plastid	49.86	27.3
GSMUA_Achr1P11640_001	Banana	cytosol	45.87	27.06
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	47.58	26.3
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	42.17	26.06
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	44.73	25.65
TraesCS3B01G100500.1	Wheat	plastid	45.87	25.24
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	46.15	24.85
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	44.44	24.8
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	35.61	23.9
CDY06413	Canola	mitochondrion, nucleus	46.44	16.45
KRH72466	Soybean	cytosol, peroxisome, plastid	25.93	14.65
KRH62244	Soybean	endoplasmic reticulum	28.77	14.62
KRH52957	Soybean	endoplasmic reticulum	28.77	14.62
KRH16854	Soybean	endoplasmic reticulum	28.49	14.51
KRH02867	Soybean	endoplasmic reticulum	28.49	14.14
KRH19026	Soybean	mitochondrion	28.21	14.0

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:35.1	EMBL:ACUP02005367	InterPro:FAD-binding_1	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase
EnsemblPlantsGene:GLYMA_08G364300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	UniProt:K7LAX4	EnsemblPlants:KRH46914	ProteinID:KRH46914	ProteinID:KRH46914.1	InterPro:OxRdtase_FAD/NAD-bd
PFAM:PF00175	PFAM:PF00667	PRINTS:PR00371	PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI000296B7FE	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:47555253..47558057

Molecular Weight (calculated)

39472.3 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.195

Length

351 amino acids

Sequence
(BLAST)

001: MKGILYASQN GNALDAYEAS LDPWLSSLWR MLSMIKPEFL PNGPDVVIQD TVLIHQPKVQ ITYHNIANDK SHFSSASDLT CLNVQIGSAR SVHPGKSSSD
101: RSRPGCFLKM AIEDIPSVQM RFEWLVQLVP PLQPRAFSIS SSQSAHPNQV HLTVNVVSWT TPYKREKKRT MLLFISICIH VPAWFHKGLL PTPSPSLPLI
201: LVGPGTGCAP FCGFVEERAL QSRTNSTDPI IFFFGCWNEN GDFLYRDFWL SHSQNKGVLS EAKGGGFYVA FSRDQPQKVY VQHKMREQSQ RIWNLLAEGA
301: AVYIAGFSRK MPADVTSAFE EIVSKENEVS REDAVRWIRA LEKCGKFHIE A

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.