Factsheet for TraesCS1A01G226400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	81.4	83.66
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	63.91	70.77
TraesCS3A01G280500.2	Wheat	plastid	66.14	64.9
Os01t0733600-01	Rice	cytosol	64.39	64.7
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	64.23	63.62
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	61.37	59.2
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	48.81	58.7
GSMUA_Achr1P11640_001	Banana	cytosol	54.21	57.31
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	55.01	54.92
Solyc02g085820.2.1	Tomato	cytosol	54.85	54.76
Bra001039.1-P	Field mustard	cytosol, mitochondrion	53.26	54.03
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	54.05	53.8
CDX74264	Canola	mitochondrion	53.1	53.78
KRH01775	Soybean	cytosol, mitochondrion	52.62	53.13
AT3G02280.2	Thale cress	mitochondrion	52.31	52.81
CDX91986	Canola	mitochondrion	52.46	52.8
KRH46914	Soybean	cytosol, nucleus, peroxisome	24.8	44.44
CDY06413	Canola	mitochondrion, nucleus	48.97	31.08
TraesCS5A01G361100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	26.23	23.47
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	25.76	23.14

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:7.11.3.1.1.2	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039
InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369
PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	EnsemblPlantsGene:TraesCS1A01G226400	EnsemblPlants:TraesCS1A01G226400.1	SEG:seg

Description

No Description!

Coordinates

chr1A:+:396439816..396452357

Molecular Weight (calculated)

70482.2 Da

IEP (calculated)

7.004

GRAVY (calculated)

-0.332

Length

629 amino acids

Sequence
(BLAST)

001: MAPSSSPLPG RLVILYASQT GNAIDAAERV GREAEHGGCP AVDVLSMDSF NPSCLPDERF MIFIVSTTGQ GDPPDSMKNF WKYLLRNHLG ARWLKGLHYA
101: MFGLGDSSYR EYNVGFPAIK LDQRLFDLGA KRITERGLGD DQHSLGYEGE LDPSLLSLWK SLNRTNPSLL PRVSDASHRK LNILGDAKVE VIYYSARQAT
201: DISDSKILIE KARSMSPALK CHNSREPQHM LQMVTNQRLT KGDTDRDVRH FELEDRRSAI SYQVGDVLEI LPSQNPSLVD DFIKRCNLDP DCYITVRTKD
301: GDKVPKDPIK LKTFVALTMD VTSASPRRYF FEVMSYFATD EREKAKLQDY TSPEGRGDLS WYNQNENRTV LEVLVDFPSV QMPFEWLVQL TPPLKKRAFS
401: ISSSPLVYPN QIHLTVSVVL PPVLFTLHIR TQHGLCSTWL TGLSPDEDDH LIPCWMRRGS LPRPRPSVPL LLIGPGTGCA PFRAFVEERA AQSAADPTTA
501: PVMFFFGCRN EDIDFLYKDF WLKHAQGQGG VLSHEKCGGF FAAFSRDQPR KVYVQDKIKE QGARVLDMLC SKSSKAAIYV AGSSTGMPAD VTVALEEVLC
601: QEGGVPREDA SGWLKDLKRA GRFIVETWS

Best Arabidopsis Sequence Match ( AT3G02280.1 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.