Factsheet for Zm00001d043539_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	76.29	62.83
Os01t0733600-01	Rice	cytosol	68.07	56.87
TraesCS3D01G280300.1	Wheat	plastid	67.88	55.99
HORVU3Hr1G069620.2	Barley	plasma membrane	66.35	55.17
TraesCS3B01G314200.1	Wheat	cytosol	66.35	54.99
TraesCS3A01G280500.2	Wheat	plastid	67.11	54.76
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	55.64	51.23
TraesCS3B01G100500.1	Wheat	plastid	59.66	48.9
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	58.7	48.81
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	60.42	48.47
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	56.6	48.37
GSMUA_Achr1P11640_001	Banana	cytosol	53.35	46.89
Solyc02g085820.2.1	Tomato	cytosol	53.92	44.76
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	53.73	44.6
CDX91986	Canola	mitochondrion	52.96	44.32
KRH01775	Soybean	cytosol, mitochondrion	52.58	44.14
Bra001039.1-P	Field mustard	cytosol, mitochondrion	52.01	43.87
CDX74264	Canola	mitochondrion	52.01	43.8
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	52.77	43.67
AT3G02280.2	Thale cress	mitochondrion	51.43	43.18
KRH46914	Soybean	cytosol, nucleus, peroxisome	23.9	35.61
Zm00001d051072_P001	Maize	plastid	10.13	25.85
CDY06413	Canola	mitochondrion, nucleus	48.37	25.53
Zm00001d043355_P001	Maize	cytosol	7.07	21.64
Zm00001d028379_P001	Maize	endoplasmic reticulum	7.46	21.2
Zm00001d026483_P001	Maize	plasma membrane	27.34	20.61
Zm00001d002024_P002	Maize	endoplasmic reticulum, peroxisome, plastid	26.96	20.06
Zm00001d021385_P002	Maize	endoplasmic reticulum, peroxisome, plastid	27.15	20.03
Zm00001d024412_P002	Maize	plastid	26.58	19.89
Zm00001d050218_P001	Maize	plasma membrane	26.2	19.52
Zm00001d032090_P001	Maize	plastid	10.71	17.55

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:35.1	UniProt:A0A1D6ND25
InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf
GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0010181	GO:GO:0016491
GO:GO:0016651	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039
InterPro:NADPH_Cyt_P450_Rdtase_alpha	ProteinID:ONM38391.1	ProteinID:ONM38392.1	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00258
PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384
PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0008451776
EnsemblPlantsGene:Zm00001d043539	EnsemblPlants:Zm00001d043539_P001	EnsemblPlants:Zm00001d043539_T001	SEG:seg	:	:

Description

NADPH reductase TAH18

Coordinates

chr3:-:203306425..203315230

Molecular Weight (calculated)

58495.9 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.277

Length

523 amino acids

Sequence
(BLAST)

001: MAPSSAEADS AVSSSGRLLV LYASQTGNAM DAAERVGREA ERGGCPAVDV LSMDSFDPSR LPSERFVVFV VSTTGQGDPP DSMKGFWRYM LRKDLDRQWL
101: EGIHHAVFGL GDSGYQKYNF AAKKLDRRLL HLGAEPVLEI GLGDDQHPSG YEGALDPWLL SMWKSLNEIN PSLLPRVSDI NDPNLSFLGD PKVHVIYYSS
201: NEVTQDPILL DSNKIISSAR SMSPALRFHA DGEPPYMLQM IPLNLAVELG LNSEKLATSI YIGIKVKKQC LTKEGTDRDV RHFELEDPSS VCHLYYTVMS
301: FFATSEREKE RLQYFASPEG RDDLYQYNQK ESRTVLEVLE DFPSVQMPFE WLVQLTPPLK KRAFSISSSP LAHPNQIHLT VSVVAWVTPF KRTRRGLCST
401: WLAGLNPNKG NLIPCWIHQG SLPPPRPLVP LVLIGPGTGC APFRAFVEER AAQAAAEPTA PVLFFFGCRN QENDFLYKDF WLTHAQDEGV LSSKRGGGFF
501: VAFSRDQPQK ALRRKCLPML QLR

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.