Factsheet for HORVU3Hr1G069620.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 3
peroxisome 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G280300.1	Wheat	plastid	91.26	90.54
TraesCS3B01G314200.1	Wheat	cytosol	90.46	90.17
TraesCS3A01G280500.2	Wheat	plastid	89.35	87.68
Os01t0733600-01	Rice	cytosol	74.4	74.76
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	73.45	72.76
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	55.17	66.35
GSMUA_Achr1P11640_001	Banana	cytosol	61.05	64.54
AT3G02280.2	Thale cress	mitochondrion	59.46	60.03
Bra001039.1-P	Field mustard	cytosol, mitochondrion	58.82	59.68
KRH01775	Soybean	cytosol, mitochondrion	58.82	59.39
CDX91986	Canola	mitochondrion	58.98	59.36
CDX74264	Canola	mitochondrion	58.35	59.1
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	59.3	59.02
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	57.55	57.46
Solyc02g085820.2.1	Tomato	cytosol	57.55	57.46
KRH46914	Soybean	cytosol, nucleus, peroxisome	27.98	50.14
CDY06413	Canola	mitochondrion, nucleus	53.9	34.21
HORVU7Hr1G083880.1	Barley	cytosol	2.54	32.0
HORVU6Hr1G074580.1	Barley	cytosol	1.43	24.32
HORVU5Hr1G088920.4	Barley	mitochondrion, peroxisome	27.34	22.93
HORVU2Hr1G040900.1	Barley	cytosol	1.59	15.62
HORVU2Hr1G074590.1	Barley	cytosol	1.11	15.56
HORVU2Hr1G074570.1	Barley	cytosol	1.11	14.58

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:7.11.3.1.1.2	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987
GO:GO:0010181	GO:GO:0016043	GO:GO:0016226	GO:GO:0016491	GO:GO:0016651	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G069620	EnsemblPlants:HORVU3Hr1G069620.2	InterPro:IPR008254	InterPro:IPR017927
InterPro:IPR023173	InterPro:IPR029039	UniProt:M0V7W1	HAMAP:MF_03178	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:NDOR1
InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371
PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218
SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0002969842	SEG:seg	:	:

Description

NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/TrEMBL;Acc:M0V7W1]

Coordinates

chrchr3H:-:527662109..527667170

Molecular Weight (calculated)

69953.5 Da

IEP (calculated)

6.891

GRAVY (calculated)

-0.293

Length

629 amino acids

Sequence
(BLAST)

001: MGPSPSPPPP PTGRLLVLYA SQTGNAMDAA ERVGREAERG GCPAVDVLSM DSFDPSCLPG ERSVVFVAST TGQGDPPDSM KGFWRYLLKK DLGTRWLEGL
101: RFAVFGLGDS GYQKYNFVAK KIDRRLLQLG AELIIDIGLG DDLHPSGYEG ALDPWLLSLW ESLNKANPSL LPRITDIINP NLNYLGDAKI EVIYYSCSDA
201: PPDSIVSDSK KLIERARSMS PALKFHNDGA PQYMLKMVTN QRLTKEEFEK DVRHFELEDP SSVISYQVGD ALEVLPSQNP SVINAFIERC NLDPDCYITI
301: RAKGGSEVSF DSLLNGSMGR IKLQTFVALT MDVASASPRR YFFEIMSHFA TAEHEKERLQ YFASPEGRDD LYQYNQKESR TVLEVLEDFP SVHMPFEWLV
401: QLTPPLKKRA FSISSSPLAH PNQIHLTVSI VSWLTPFKRT RQGLCSTWLA GLSPNEENLI PCWVHKGSLP PPQPSTPLVL IGPGTGCAPF RAFVEERAAQ
501: SARGPTAPIL FFFGCRNEGR DFLYRDFWLK HAQDKGVLSL KEGGGFFVAF SRDQPQKVYV QHKIKEQSAR VWNILCSGAS IYVAGSSTKM PADVTAALEE
601: VVRQKGGDAA SGWRRKLERA GKFNIETWS

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.