Factsheet for TraesCS3B01G100500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	86.83	84.97
TraesCS3B01G314200.1	Wheat	cytosol	71.94	72.74
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	67.4	67.72
Os01t0733600-01	Rice	cytosol	65.67	66.93
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	48.9	59.66
GSMUA_Achr1P11640_001	Banana	cytosol	55.33	59.33
CDX74264	Canola	mitochondrion	54.86	56.36
AT3G02280.2	Thale cress	mitochondrion	55.02	56.34
CDX91986	Canola	mitochondrion	55.17	56.32
Bra001039.1-P	Field mustard	cytosol, mitochondrion	54.7	56.29
KRH01775	Soybean	cytosol, mitochondrion	54.86	56.18
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	54.86	55.38
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	54.55	55.24
Solyc02g085820.2.1	Tomato	cytosol	54.08	54.76
TraesCS6B01G187700.4	Wheat	cytosol	20.85	48.9
KRH46914	Soybean	cytosol, nucleus, peroxisome	25.24	45.87
CDY06413	Canola	mitochondrion, nucleus	48.75	31.38
TraesCS5B01G363800.1	Wheat	peroxisome	27.12	24.64
TraesCS2B01G534200.1	Wheat	endoplasmic reticulum	26.18	24.13

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:35.1	ncoils:Coil
InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927
InterPro:IPR023173	InterPro:IPR029039	HAMAP:MF_03178	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:NDOR1	InterPro:OxRdtase_FAD/NAD-bd
PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902
PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343
SUPFAM:SSF63380	EnsemblPlantsGene:TraesCS3B01G100500	EnsemblPlants:TraesCS3B01G100500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:66873290..66877508

Molecular Weight (calculated)

71898.8 Da

IEP (calculated)

8.975

GRAVY (calculated)

-0.495

Length

638 amino acids

Sequence
(BLAST)

001: MSPSSPQHPP PPPANGGRLL VLYASQTGHA EEAAGRVGRE AERGGCPAVH VLSMDSFDPR RLPGERFVVF VVSTGGQGDP PDSMKGFWRY LLKKNLDARW
101: LQGFRYAVFG LGDSRYQDYN VAAKKLCKRL SQLGATKPII GIGLGDDQHS SGYEKALAPW LLSLWNSLNR TNPSLLPRIP DIINPNLNNL GDAKGRNSKK
201: LIRRARSMNP ALKFHNDGEP QYMLKMVTNQ RLTKKEPERD VRHFELEDQS SAIHYQVGDA LEILPSQNPS AVNAFIKRCN LDPDCYITIR AKGGDKYSKD
301: SPVNGLMDRI KLRTFVALTM DVASASPGRY FYEIMSYFAT AQHEKERLHC FATTEDEKER LQKKRLQKER LEEFASPEGR DDLYQYNHKE GRTVLEVLEE
401: FPWVHMPFEW LVQLTPPLKK RAFSISSSPL AHPNQIHLTV SVVSWLATPF RRKHGLCSTW LAGLDPNEGT LVPCWIHRGS LPPDPATPLV LIGPGTGCAP
501: FRAFVEERAV QRVKEPTAPI LFFFGCRNED DDFLYRDFWL HHAQDNRVLS VEEGGGFFVA FSRDQPEKVY VQHKIREQSA RVLNMLCSGA AVYVAGSSTK
601: MPADVRAALE EVVREKGGDA GWLRKLERAG KYNTETWS

Best Arabidopsis Sequence Match ( AT3G02280.1 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.