Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0014g03120.t01 | Wine grape | cytosol | 22.43 | 43.88 |
| TraesCS3B01G314200.1 | Wheat | cytosol | 54.41 | 23.45 |
| CDY12377 | Canola | plastid | 23.16 | 22.5 |
| TraesCS3B01G100500.1 | Wheat | plastid | 48.9 | 20.85 |
| TraesCS2B01G534200.1 | Wheat | endoplasmic reticulum | 25.37 | 9.97 |
| TraesCS5B01G363800.1 | Wheat | peroxisome | 24.63 | 9.54 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G187700.4 | EnsemblPlantsGene:TraesCS6B01G187700 | Gene3D:3.40.50.360 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0055114 | InterPro:Flavdoxin-like | InterPro:Flavodoxin/NO_synth |
| InterPro:Flavoprotein-like_sf | InterPro:IPR008254 | InterPro:IPR029039 | PANTHER:PTHR19384 | PANTHER:PTHR19384:SF10 | PFAM:PF00258 |
| PFscan:PS50902 | PRINTS:PR00369 | SUPFAM:SSF52218 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:215140534..215149007
Molecular Weight (calculated)
30493.3 Da
IEP (calculated)
5.660
GRAVY (calculated)
-0.328
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSSELPE RLVVLYASQT GNAMDAAERV GREAERGGCP AVDVLSMDCF DPSCLPRERY VVFVVSTMGQ GDPPDSMKDF WTYLTRKSLG ARWLEGLFYA
101: VFGLGDSTYG KYNYPAKKLD RRLFNLGAER ITEKGLGDDQ HSSGYEGALD PWLLILWKSL NQTNPSLLPR ISDAIHPNLN ILGDAKVEVI YYSAPQDTTI
201: SDPKILIERA RSMSPALKYH NEGEPQFMLQ MVYHEEGEYR QLGFWAGKGA NIGNLFCAVP KVLKLHESHF WN
101: VFGLGDSTYG KYNYPAKKLD RRLFNLGAER ITEKGLGDDQ HSSGYEGALD PWLLILWKSL NQTNPSLLPR ISDAIHPNLN ILGDAKVEVI YYSAPQDTTI
201: SDPKILIERA RSMSPALKYH NEGEPQFMLQ MVYHEEGEYR QLGFWAGKGA NIGNLFCAVP KVLKLHESHF WN
001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS
Arabidopsis Description
ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.