CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013810.1-P	Field mustard	endoplasmic reticulum	97.55	97.55
CDY70343	Canola	cytosol, endoplasmic reticulum, peroxisome	81.12	94.94
CDY03447	Canola	endoplasmic reticulum	88.76	88.63
CDY34288	Canola	endoplasmic reticulum	88.04	87.91
CDX92639	Canola	vacuole	87.03	86.91
CDY11017	Canola	endoplasmic reticulum, plastid, vacuole	86.6	86.47
AT4G24520.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	83.14	83.38
KRH62244	Soybean	endoplasmic reticulum	73.49	73.81
Solyc04g076380.2.1	Tomato	plastid	72.33	73.18
PGSC0003DMT400024163	Potato	endoplasmic reticulum	71.9	72.74
KRH52957	Soybean	endoplasmic reticulum	72.33	72.65
KRH16854	Soybean	endoplasmic reticulum	72.05	72.57
VIT_18s0001g07630.t01	Wine grape	endoplasmic reticulum	70.75	71.37
KRH72466	Soybean	cytosol, peroxisome, plastid	63.4	70.85
CDY28169	Canola	plastid	61.96	61.78
CDY14183	Canola	cytosol, peroxisome, plastid	61.96	61.78
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	62.68	61.44
CDY03543	Canola	plastid	62.39	60.99
CDY51656	Canola	plastid	61.96	60.91
CDX68634	Canola	plastid	62.39	60.81
CDY34997	Canola	mitochondrion	8.5	27.19
CDX74264	Canola	mitochondrion	23.78	26.57
CDX91986	Canola	mitochondrion	23.49	26.08
CDY12377	Canola	plastid	8.07	20.0
CDY06413	Canola	mitochondrion, nucleus	23.49	16.45

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	GO:A0A078H9E6
UniProt:A0A078H9E6	EnsemblPlants:CDY34287	ProteinID:CDY34287	ProteinID:CDY34287.1	InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016020	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00056319001
InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha
InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208
PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0004EECFFC	SEG:seg

Description

BnaA01g13900DNADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A078H9E6]

Coordinates

chrLK032332:+:137971..141965

Molecular Weight (calculated)

76680.2 Da

IEP (calculated)

6.013

GRAVY (calculated)

-0.303

Length

694 amino acids

Sequence
(BLAST)

001: MTSTFDASSA LAKQLKSVLG MSLDTPVSDD AVLVIATTSL ALAVGFAALL WKKTTSDQSR EVKPLMVPKS LMTKEEEEDL GSGKSRVSIF FGTQTGNAEG
101: FAKALAEEIK VRYEKAAVKV IDLDDYAADD DQYKEKLKKE TLSFFCVATY GDGEPTDNAA RFYKWFTEGN EGDTRLQQLT YSVFALGNRQ YEHFNKIGIV
201: LDEELSKKGA KRLIQVGLGD DDQSIEDDFN AWKESLWPEL DKLLRGEEDT SVVTPYKAAI PEYRLVIHDP SFISEKSMDS NLANGNAAID IHHPCRADVA
301: VQRELHTPES DRSCIHLEFD ISGTGITYET GDHVRVYAEN HAELVEEAAK LLGHTLELVF SIHADKEDGS PLGSSLPPPF PGPCTLGTAL AKYADLLTPP
401: RKSALVALGA YATEPSEAKK LKHLTSRDGK DEYSKWIAAS QRSLLQVMSA FPSAKPPLGV FFAAIAPRLQ PRYYSISSSP RLAPNRVHVT CALVYGPTPT
501: GRIHKGLCST WMKNAVPAEK SRECSGAPIF IRASNFKLPS NPLTPIVMVG PGTGLAPFRG FLQKRMALKE DGVELGPSLL FFGCRNRRMD FIYEDELNNF
601: VDKGVISELI VAFSREGAQK EYVQHKIVQK AAQFWNLIKE EGYLYVCGDA KGMARDVHRT LHTIVQEQEG VSSSEAEAIV KKLQTEGRYL RDVW

Best Arabidopsis Sequence Match ( AT4G24520.1 )
(BLAST)

001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW

Arabidopsis Description

ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.