CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013811.1-P	Field mustard	endoplasmic reticulum	98.99	98.99
CDY03447	Canola	endoplasmic reticulum	96.83	96.83
CDX92639	Canola	vacuole	92.37	92.37
CDY11017	Canola	endoplasmic reticulum, plastid, vacuole	91.94	91.94
AT4G24520.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	88.78	89.16
CDY34287	Canola	cytosol, endoplasmic reticulum, peroxisome	87.91	88.04
CDY70343	Canola	cytosol, endoplasmic reticulum, peroxisome	74.39	87.18
Solyc04g076380.2.1	Tomato	plastid	74.39	75.36
KRH62244	Soybean	endoplasmic reticulum	74.53	74.96
KRH52957	Soybean	endoplasmic reticulum	74.53	74.96
PGSC0003DMT400024163	Potato	endoplasmic reticulum	73.81	74.78
KRH16854	Soybean	endoplasmic reticulum	73.81	74.46
VIT_18s0001g07630.t01	Wine grape	endoplasmic reticulum	72.66	73.4
KRH72466	Soybean	cytosol, peroxisome, plastid	63.88	71.5
CDY14183	Canola	cytosol, peroxisome, plastid	63.31	63.22
CDY28169	Canola	plastid	62.45	62.36
CDY51656	Canola	plastid	63.17	62.18
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	63.31	62.15
CDY03543	Canola	plastid	63.17	61.83
CDX68634	Canola	plastid	62.73	61.24
CDX74264	Canola	mitochondrion	24.75	27.7
CDX91986	Canola	mitochondrion	24.46	27.2
CDY34997	Canola	mitochondrion	8.49	27.19
CDY12377	Canola	plastid	8.49	21.07
CDY06413	Canola	mitochondrion, nucleus	24.03	16.85

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	GO:A0A078HBX9
UniProt:A0A078HBX9	EnsemblPlants:CDY34288	ProteinID:CDY34288	ProteinID:CDY34288.1	InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016020	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00056320001
InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha
InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208
PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0004EE1C78	SEG:seg

Description

BnaA01g13910DNADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A078HBX9]

Coordinates

chrLK032332:-:142350..146644

Molecular Weight (calculated)

76551.7 Da

IEP (calculated)

5.009

GRAVY (calculated)

-0.269

Length

695 amino acids

Sequence
(BLAST)

001: MSSALYASGV FKEVKSILGA FLGDSVSDDV VLVIATTSLA LVVGFVVLVW RKTTSDQSKE LKPLVIPKSL MAKDEDEDVD LGSGKERVSI FFGTQTGTAE
101: GFAKALAEEI KARYEKAAVK VIDLDDYAAD DDQYEEKLKK ETLSFFCVAT YGDGEPTDNA ARFYKWFTEG TEGDIRLQKL AYGVFALGNR QYEHFNKIGI
201: VLDEELSKKG AKRLIEVGLG DDDQSIEDDF NAWKESLWPE LDKLLRDEDD TSVATPYTAA IPEYRVMIHD PSFISEKSVD SSVANGNAAI DIHHPRRGNV
301: AVQRELHTPE SDRSCIHLEF DISGTSITYE TGDHVGVYAE NHGELVEEAG KLLGHTLDLV FSIHADKEDG SPLGSSLPPP FPGPCTLGTA LAKYADLLNP
401: PRKSALVALA AYATEPSEAK KLKHLTSPDG KDEYSQWIVA SQRSLLEVMA AFPSAKPPLG VFFAAIAPRL QPRYYSISSS PRLAPNRVHV TCALVYGPTP
501: TGRIHKGLCS TWMKNAVPAE KSRECSGAPI FIRASNFKLP SNPSTPIVMV GPGTGLAPFR GFLQERMALK EDGVELGPSL LFFGCRNRRM DFIYEDELNN
601: YADQGVISEL IVAFSREGAQ KEYVQHKIIE KATQVWNLIK EEGYLYVCGD AKGMARDVHR TLHTIVQEQE GVSSSEAEAI VKKLQTEGRY LRDVW

Best Arabidopsis Sequence Match ( AT4G24520.1 )
(BLAST)

001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW

Arabidopsis Description

ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.