Factsheet for Solyc04g076380.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 4
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plastid: 26371478

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024163	Potato	endoplasmic reticulum	98.4	98.4
VIT_18s0001g07630.t01	Wine grape	endoplasmic reticulum	78.86	78.63
KRH52957	Soybean	endoplasmic reticulum	78.72	78.15
KRH62244	Soybean	endoplasmic reticulum	78.43	77.86
KRH16854	Soybean	endoplasmic reticulum	76.97	76.63
CDY03447	Canola	endoplasmic reticulum	75.66	74.68
CDX92639	Canola	vacuole	75.51	74.53
CDY11017	Canola	endoplasmic reticulum, plastid, vacuole	75.51	74.53
CDY34288	Canola	endoplasmic reticulum	75.36	74.39
Bra013811.1-P	Field mustard	endoplasmic reticulum	75.22	74.24
AT4G24520.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	74.78	74.13
Bra019223.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	72.01	73.51
KRH72466	Soybean	cytosol, peroxisome, plastid	66.03	72.95
Bra013810.1-P	Field mustard	endoplasmic reticulum	73.62	72.77
CDY34287	Canola	cytosol, endoplasmic reticulum, peroxisome	73.18	72.33
CDY70343	Canola	cytosol, endoplasmic reticulum, peroxisome	61.66	71.33
Solyc07g019460.2.1	Tomato	cytosol	66.91	64.2
Solyc02g085820.2.1	Tomato	cytosol	24.49	26.67

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005829	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009698	GO:GO:0009719	GO:GO:0009737
GO:GO:0009987	GO:GO:0010181	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0019748
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173
InterPro:IPR029039	UniProt:K4BU76	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R
PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208	PRINTS:PR00369	PRINTS:PR00371
PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218
SUPFAM:SSF52343	SUPFAM:SSF63380	EnsemblPlantsGene:Solyc04g076380.2	EnsemblPlants:Solyc04g076380.2.1	TMHMM:TMhelix	UniParc:UPI0002765C78
SEG:seg	:	:	:	:	:

Description

NADPH--cytochrome P450 reductase 1 [Source:Projected from Arabidopsis thaliana (AT4G24520) UniProtKB/Swiss-Prot;Acc:Q9SB48]

Coordinates

chr4:-:61280580..61287338

Molecular Weight (calculated)

75861.8 Da

IEP (calculated)

4.838

GRAVY (calculated)

-0.270

Length

686 amino acids

Sequence
(BLAST)

001: MESSLELLRS IESALGVSLG SDTVLVLLTT SFAVIVGLVV FFLKRSSDRS KEVKPVVFPK SLHVEPEEET ELEPGKVKVT VFFGTQTGTA EGFAKALSEE
101: IKARYEKAVV KVVDMDDYAA DDDIYEEKLK KETLAFFMVA TYGDGEPTDN AARFYKWFTE GQERGAWLQN LSYGVFALGN RQYEHFNKIG KVIDEQLSEQ
201: GAKRLVPVGL GDDDQCIEDD FSAWREQLWP ELDQILRDED DANSAATPYT AAIPEYRLVI HDTTMSLEDK HAGMANGNTT YDIHHPCKVN VAVQRELHTP
301: ESDRSCIHLE FDISGTGISY ETGDHVGVYA ENSEDTVEEA ARLLGQSLDL IFSIHTDKED GTAGGGSLPP PFPGPCTLRA ALACYADLLN PPRKATLVAL
401: AAHAAEPSEA EKLKFLASPQ GKDEYSQWIV ASQRSLIEVM AEFPSAKPPL GVFFAAVAPR LQPRYYSISS SPRFAPARVH VTCALVYGPT PTGRIHKGVC
501: STWMKNAVPS EKSHNCSSAP IFIRPSNFKL PADPSIPIVM VGPGTGLAPF RGFLQERAAL KEDGAQLGPA LLFFGCRNRR MDFIYEEELQ SFVDQGVISE
601: LIIAFSREGS QKEYVQHKMM EKASDVWSLI SQEGYLYVCG DAKGMARDVH RTLHTIVQEQ ENADSSKAEA VVKKLQMDGR YLRDVW

Best Arabidopsis Sequence Match ( AT4G24520.1 )
(BLAST)

001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW

Arabidopsis Description

ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.