CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32819	Soybean	cytosol	99.53	99.53
KRH67989	Soybean	cytosol	89.72	90.14
KRG96247	Soybean	cytosol	88.78	89.2
Solyc01g007270.1.1	Tomato	cytosol	27.57	84.29
Bra009182.1-P	Field mustard	cytosol	84.11	83.72
CDY04985	Canola	cytosol	84.11	83.72
Solyc10g082020.1.1	Tomato	cytosol	84.58	83.41
VIT_08s0007g02480.t01	Wine grape	cytosol	84.11	83.33
AT5G06300.1	Thale cress	cytosol	84.11	82.95
PGSC0003DMT400042349	Potato	cytosol	81.31	79.82
PGSC0003DMT400072345	Potato	cytosol	84.11	78.95
KRH22873	Soybean	cytosol	71.96	73.68
KRH26448	Soybean	cytosol	71.5	73.21
KRH15614	Soybean	cytosol, extracellular, plastid	23.36	72.46
KRH15578	Soybean	cytosol	25.7	72.37
KRH29895	Soybean	cytosol	73.83	71.82
KRH19875	Soybean	cytosol	73.36	71.69
KRG95991	Soybean	cytosol	73.36	71.69
GSMUA_Achr8P04060_001	Banana	cytosol	75.23	71.24
KRH67693	Soybean	cytosol	72.9	71.23
KRH05931	Soybean	cytosol	70.09	69.77
GSMUA_Achr2P08380_001	Banana	cytosol	74.3	69.43
KRH51716	Soybean	cytosol	70.56	68.33
KRH17410	Soybean	cytosol	67.76	68.08
KRH61054	Soybean	cytosol	71.03	67.56
KRH25030	Soybean	cytosol	72.43	66.52
KRH07771	Soybean	cytosol	22.43	65.75
TraesCS3A01G211100.1	Wheat	cytosol	71.03	64.96
Os01t0588900-01	Rice	cytosol	73.36	64.88
TraesCS3B01G241600.1	Wheat	cytosol	70.56	63.18
TraesCS3D01G213900.1	Wheat	cytosol	70.56	62.66
EES03190	Sorghum	cytosol	73.36	62.55
KRH52208	Soybean	cytosol	60.75	61.03
Zm00001d011246_P002	Maize	cytosol	71.96	60.39
GSMUA_Achr6P35930_001	Banana	cytosol	62.62	60.09
KRH32950	Soybean	cytosol	57.48	60.0
KRH05430	Soybean	cytosol	60.28	59.72
Os05t0591600-01	Rice	cytosol	73.36	59.02
TraesCS1B01G471300.1	Wheat	cytosol, plastid	73.36	58.58
KRH32483	Soybean	cytosol, golgi, mitochondrion	49.53	58.56
KXG22670	Sorghum	plastid	70.56	58.08
KRH61527	Soybean	cytosol	60.75	57.78
TraesCS1D01G444500.1	Wheat	cytosol	72.9	57.14
Zm00001d039174_P001	Maize	plastid	70.56	56.98
KRH39935	Soybean	cytosol	59.35	56.95
HORVU1Hr1G094290.7	Barley	plastid	73.83	55.05
KRH32487	Soybean	cytosol	4.67	52.63
Bra028736.1-P	Field mustard	nucleus	57.01	47.47
HORVU3Hr1G050770.10	Barley	mitochondrion	71.03	43.55
Zm00001d044327_P001	Maize	plastid	46.73	38.76

Protein Annotations

EntrezGene:100816928	MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:ACUP02001188	EnsemblPlantsGene:GLYMA_02G198300	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	UniProt:I1JGJ6	EnsemblPlants:KRH72214	ProteinID:KRH72214	ProteinID:KRH72214.1	InterPro:LOG
InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF20	SUPFAM:SSF102405	TIGRFAMs:TIGR00730
UniParc:UPI0002337459	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:37959065..37963589

Molecular Weight (calculated)

23526.4 Da

IEP (calculated)

5.177

GRAVY (calculated)

-0.115

Length

214 amino acids

Sequence
(BLAST)

001: MEETKSKFKR ICVYCGSSSG NKASYQEAAV ELGKEMVERR IDLVYGGGSV GLMGLVSQAV HDGGRHVLGV IPKSLMPREI TGDPIGEVRA VSDMHQRKAE
101: MARQADAFIA LPGGYGTLEE LLEIITWAQL GIHSKPVGLL NVEGFYNSLL SFIDKAVDEG FISPKARRII VSAPTAKDLV RELEEHVPER DEVVSKLVWE
201: DRLNYVVPES EVAM

Best Arabidopsis Sequence Match ( AT5G06300.1 )
(BLAST)

001: MEETKSRFKR ICVFCGSSSG KKPSYQEAAI QLGNELVERR IDLVYGGGSV GLMGLVSQAV HHGGRHVLGV IPKTLMPREI TGETIGEVKA VADMHQRKAE
101: MARQADAFIA LPGGYGTLEE LLEVITWAQL GIHRKPVGLL NVDGYYNSLL TFIDKAVDEG FISPMARRII VSAPNAKELV RQLEEYEPEF DEITSKLVWD
201: EVDRISYVPG SEVATAT

Arabidopsis Description

LOG7Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.