Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 3
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g007270.1.1 | Tomato | cytosol | 22.42 | 71.43 |
| GSMUA_Achr2P08380_001 | Banana | cytosol | 70.85 | 69.0 |
| GSMUA_Achr8P04060_001 | Banana | cytosol | 69.51 | 68.58 |
| VIT_08s0007g02480.t01 | Wine grape | cytosol | 62.33 | 64.35 |
| CDY04985 | Canola | cytosol | 61.88 | 64.19 |
| KRH67989 | Soybean | cytosol | 60.99 | 63.85 |
| KRG96247 | Soybean | cytosol | 60.99 | 63.85 |
| KRH32819 | Soybean | cytosol | 60.54 | 63.08 |
| AT5G06300.1 | Thale cress | cytosol | 60.99 | 62.67 |
| KRH72214 | Soybean | cytosol | 60.09 | 62.62 |
| GSMUA_Achr6P36490_001 | Banana | cytosol | 60.54 | 62.21 |
| Solyc10g082020.1.1 | Tomato | cytosol | 60.09 | 61.75 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 60.09 | 61.19 |
| Os01t0588900-01 | Rice | cytosol | 65.47 | 60.33 |
| GSMUA_Achr8P19190_001 | Banana | cytosol | 60.09 | 59.82 |
| PGSC0003DMT400042349 | Potato | cytosol | 58.3 | 59.63 |
| TraesCS3A01G211100.1 | Wheat | cytosol | 61.88 | 58.97 |
| PGSC0003DMT400072345 | Potato | cytosol | 60.09 | 58.77 |
| GSMUA_Achr1P09040_001 | Banana | cytosol | 57.4 | 58.72 |
| TraesCS3B01G241600.1 | Wheat | cytosol | 62.33 | 58.16 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 40.36 | 58.06 |
| EES03190 | Sorghum | cytosol | 65.02 | 57.77 |
| TraesCS3D01G213900.1 | Wheat | cytosol | 62.33 | 57.68 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 50.67 | 57.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.57 | 56.93 |
| GSMUA_Achr7P04070_001 | Banana | cytosol | 53.81 | 55.81 |
| KXG22670 | Sorghum | plastid | 64.57 | 55.38 |
| GSMUA_Achr2P03620_001 | Banana | cytosol | 54.26 | 55.25 |
| Zm00001d011246_P002 | Maize | cytosol | 62.33 | 54.51 |
| GSMUA_Achr1P07310_001 | Banana | cytosol, mitochondrion | 53.36 | 54.34 |
| TraesCS1B01G471300.1 | Wheat | cytosol, plastid | 64.57 | 53.73 |
| GSMUA_Achr2P00980_001 | Banana | cytosol | 59.19 | 53.44 |
| GSMUA_Achr3P29740_001 | Banana | cytosol, plastid | 46.64 | 52.53 |
| Zm00001d039174_P001 | Maize | plastid | 62.33 | 52.45 |
| GSMUA_Achr3P25920_001 | Banana | cytosol | 50.22 | 52.34 |
| Os05t0591600-01 | Rice | cytosol | 62.33 | 52.26 |
| TraesCS1D01G444500.1 | Wheat | cytosol | 63.23 | 51.65 |
| GSMUA_Achr8P31460_001 | Banana | cytosol | 47.98 | 50.71 |
| HORVU1Hr1G094290.7 | Barley | plastid | 64.13 | 49.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.26 | 48.99 |
| GSMUA_Achr2P08480_001 | Banana | mitochondrion | 50.67 | 44.66 |
| GSMUA_Achr4P03590_001 | Banana | plastid | 49.33 | 44.53 |
| HORVU3Hr1G050770.10 | Barley | mitochondrion | 61.88 | 39.54 |
| Bra028735.1-P | Field mustard | cytosol | 17.49 | 30.95 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P35930_001 | EnsemblPlants:GSMUA_Achr6T35930_001 | EnsemblPlantsGene:GSMUA_Achr6G35930_001 | Gene3D:3.40.50.450 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 |
| InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF13 | PFAM:PF03641 | SEG:seg |
| SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI0002948FDF | UniProt:M0TD36 | MapMan:11.4.1.2 | : |
Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG [Source:GMGC_GENE;Acc:GSMUA_Achr6G35930_001]
Coordinates
chr6:-:34037604..34040895
Molecular Weight (calculated)
24693.8 Da
IEP (calculated)
4.924
GRAVY (calculated)
-0.044
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEKGKKVE VAEVVEEKRS RFRKICVFCG NQPGRKAIYQ EAAIELGRQL VESGIDLVYG GGNIGLMGIV CQAVHEGGRH VLGVISKSSM AGEYITSQTV
101: GEVQIVSDMH ERKAETVRRA DAFIALPGGY GTLEELLEVV TWAQLGIHKK PVGLLNIDGF YDSLLFFVDM AVDEGFITRA ARNIIISAPS AKELIRKFEE
201: YVSEYETNLV WDTEKELLEV SHL
101: GEVQIVSDMH ERKAETVRRA DAFIALPGGY GTLEELLEVV TWAQLGIHKK PVGLLNIDGF YDSLLFFVDM AVDEGFITRA ARNIIISAPS AKELIRKFEE
201: YVSEYETNLV WDTEKELLEV SHL
001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF
Arabidopsis Description
LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.