Factsheet for GSMUA_AchrUn_randomP07220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P03620_001	Banana	cytosol	83.81	94.52
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	82.19	92.69
GSMUA_Achr7P04070_001	Banana	cytosol	72.47	83.26
GSMUA_AchrUn_...	Banana	cytosol	68.02	83.17
VIT_18s0001g00210.t01	Wine grape	cytosol	69.23	78.08
VIT_03s0038g03420.t01	Wine grape	cytosol	71.66	77.29
GSMUA_Achr1P09040_001	Banana	cytosol	64.78	73.39
GSMUA_Achr6P36490_001	Banana	cytosol	64.37	73.27
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	23.48	72.5
Zm00001d021450_P001	Maize	cytosol	68.02	72.41
EER97131	Sorghum	cytosol	68.83	72.34
OQU88832	Sorghum	cytosol, plastid	65.18	70.61
AT4G35190.1	Thale cress	cytosol	64.78	70.18
CDX69118	Canola	cytosol	62.75	69.2
Bra011592.1-P	Field mustard	cytosol	65.18	68.8
CDY52642	Canola	cytosol	64.78	68.38
Bra020803.1-P	Field mustard	cytosol	62.75	67.98
CDX76318	Canola	cytosol	62.75	67.98
GSMUA_Achr11P...	Banana	cytosol, plastid	59.51	67.12
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	42.11	67.1
TraesCS5A01G347400.1	Wheat	cytosol	66.4	66.67
TraesCS5B01G348400.1	Wheat	cytosol	65.99	66.26
TraesCS5B01G348300.1	Wheat	cytosol	66.4	65.6
GSMUA_Achr8P19190_001	Banana	cytosol	59.11	65.18
Os09t0547500-01	Rice	cytosol, plastid	59.51	64.76
TraesCS5D01G353600.1	Wheat	cytosol	65.18	64.66
TraesCS5A01G347500.1	Wheat	cytosol	63.16	63.67
TraesCS5B01G348600.1	Wheat	cytosol	61.54	63.07
GSMUA_Achr2P08380_001	Banana	cytosol	57.49	62.01
GSMUA_Achr2P00980_001	Banana	cytosol	61.54	61.54
GSMUA_Achr8P04060_001	Banana	cytosol	56.28	61.5
CDY17522	Canola	cytosol	56.68	61.14
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	47.37	59.39
GSMUA_Achr3P25920_001	Banana	cytosol	49.8	57.48
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	45.34	56.57
GSMUA_Achr8P31460_001	Banana	cytosol	48.18	56.4
GSMUA_Achr6P35930_001	Banana	cytosol	48.99	54.26
KRH32487	Soybean	cytosol	4.05	52.63
GSMUA_Achr2P08480_001	Banana	mitochondrion	52.23	50.99
GSMUA_Achr4P03590_001	Banana	plastid	49.8	49.8

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP07220_001	EnsemblPlants:GSMUA_AchrUn_randomT07220_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG07220_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0002954F78	UniProt:M0U733	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07220_001]

Coordinates

chrchrUn_random:-:32054590..32056425

Molecular Weight (calculated)

26847.3 Da

IEP (calculated)

6.707

GRAVY (calculated)

-0.062

Length

247 amino acids

Sequence
(BLAST)

001: MEAVKVGNSR FKRMCVFCGS STGKRHCYQD AAVELGKELV ARKVDLVYGG GSVGLMGLVS EAVHSGGGHV IGIIPRTLMS KEITGETFGE VKPVASMHQR
101: KAEMARHSDA FIALPGGYGT LEELLEVITW AQLGIHNKPV GLLNVDGYYN SLLAFIDKAV EDGFIQPYQR YIFVSAPNAK DLVQKLEEYV PVEDAVAAKL
201: SWEMEQMGLN STLHAEIART ASNSGKHQLY DESSSRCCLR CALCGST

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.