Factsheet for Bra020803.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76318	Canola	cytosol	99.56	99.56
AT4G35190.1	Thale cress	cytosol	91.23	91.23
Bra011592.1-P	Field mustard	cytosol	90.35	88.03
VIT_03s0038g03420.t01	Wine grape	cytosol	80.7	80.35
VIT_18s0001g00210.t01	Wine grape	cytosol	76.75	79.91
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	27.19	77.5
GSMUA_Achr2P03620_001	Banana	cytosol	70.18	73.06
GSMUA_AchrUn_...	Banana	cytosol	62.72	70.79
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	67.98	70.78
Bra009182.1-P	Field mustard	cytosol	66.23	70.23
Bra023107.1-P	Field mustard	cytosol	62.72	69.42
GSMUA_Achr7P04070_001	Banana	cytosol	65.35	69.3
Bra017202.1-P	Field mustard	cytosol	63.6	69.05
Bra011962.1-P	Field mustard	cytosol	64.04	68.54
Bra034399.1-P	Field mustard	cytosol	64.04	68.54
Zm00001d021450_P001	Maize	cytosol	67.98	66.81
EER97131	Sorghum	cytosol	67.98	65.96
OQU88832	Sorghum	cytosol, plastid	65.35	65.35
Bra003135.1-P	Field mustard	cytosol	47.81	65.27
Bra039788.1-P	Field mustard	cytosol	46.49	63.47
Bra007000.1-P	Field mustard	cytosol	46.49	63.1
GSMUA_AchrUn_...	Banana	cytosol	67.98	62.75
Bra017270.1-P	Field mustard	cytosol	57.89	61.97
TraesCS5B01G348400.1	Wheat	cytosol	65.35	60.57
TraesCS5D01G353600.1	Wheat	cytosol	64.47	59.04
TraesCS5A01G347400.1	Wheat	cytosol	63.6	58.94
TraesCS5B01G348300.1	Wheat	cytosol	64.04	58.4
TraesCS5A01G347500.1	Wheat	cytosol	62.28	57.96
Bra008924.1-P	Field mustard	cytosol	54.82	57.87
Bra023351.1-P	Field mustard	cytosol	54.82	57.6
Os09t0547500-01	Rice	cytosol, plastid	57.02	57.27
TraesCS5B01G348600.1	Wheat	cytosol	60.09	56.85
Bra036562.1-P	Field mustard	cytosol	47.37	56.25
Bra028736.1-P	Field mustard	nucleus	48.25	42.8
KRH32487	Soybean	cytosol	3.51	42.11
Bra028735.1-P	Field mustard	cytosol	17.98	32.54

Protein Annotations

EnsemblPlants:Bra020803.1	EnsemblPlants:Bra020803.1-P	EnsemblPlantsGene:Bra020803	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF26	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0002545FF7	UniProt:M4DWA9	MapMan:11.4.1.2	:

Description

AT4G35190 (E=1e-109) | unknown protein

Coordinates

chrA08:-:12039424..12041067

Molecular Weight (calculated)

25211.4 Da

IEP (calculated)

5.953

GRAVY (calculated)

-0.117

Length

228 amino acids

Sequence
(BLAST)

001: MEIVKSRFKR ICVFCGSSSG NRECYRDAAI DLAQELIKKR LNLVYGGGSI GLMGLVSQAV HEAGCHVLGI IPRTLMDKEI TGETYGEVRA VADMHQRKAE
101: MASHSDCFIA LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVDGYYDYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYEPVS DGTIAKSKWE
201: AEKKVQQAQQ QQQVVFCSNT SIQTEIAL

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.