Factsheet for Bra039788.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003135.1-P	Field mustard	cytosol	96.41	96.41
Bra007000.1-P	Field mustard	cytosol	95.81	95.24
CDY30875	Canola	cytosol	98.8	76.74
CDX76213	Canola	cytosol	91.62	75.74
AT3G53450.1	Thale cress	cytosol	95.81	74.42
TraesCS4D01G250300.1	Wheat	mitochondrion	29.94	73.53
TraesCS4A01G054500.1	Wheat	mitochondrion	29.34	72.06
Bra017202.1-P	Field mustard	cytosol	88.02	70.0
Bra023107.1-P	Field mustard	cytosol	84.43	68.45
Solyc09g007830.2.1	Tomato	cytosol	85.63	65.6
PGSC0003DMT400055525	Potato	cytosol	85.63	65.6
PGSC0003DMT400027157	Potato	cytosol	85.03	64.55
KRH19875	Soybean	cytosol	83.23	63.47
Solyc10g084150.1.1	Tomato	cytosol	83.23	63.18
GSMUA_Achr6P36490_001	Banana	cytosol	82.04	63.13
KRG95991	Soybean	cytosol	82.63	63.01
VIT_08s0040g01780.t01	Wine grape	cytosol	81.44	62.39
KRH67693	Soybean	cytosol	81.44	62.1
TraesCS1D01G154700.1	Wheat	mitochondrion	77.25	62.02
TraesCS1B01G173200.1	Wheat	mitochondrion	77.25	62.02
TraesCS1A01G156100.1	Wheat	mitochondrion	77.25	62.02
GSMUA_Achr1P09040_001	Banana	cytosol	80.84	61.93
Bra034399.1-P	Field mustard	cytosol	78.44	61.5
Zm00001d014016_P001	Maize	mitochondrion, nucleus	76.05	61.35
EER94070	Sorghum	mitochondrion	75.45	60.87
Bra011962.1-P	Field mustard	cytosol	77.25	60.56
TraesCS4D01G310800.1	Wheat	mitochondrion	70.06	57.07
TraesCS4B01G250400.1	Wheat	mitochondrion	70.06	57.07
TraesCS4A01G413200.1	Wheat	mitochondrion	70.06	56.8
Bra009182.1-P	Field mustard	cytosol	73.05	56.74
TraesCS4B01G313800.1	Wheat	mitochondrion	68.86	56.1
EES05457	Sorghum	cytosol	75.45	51.64
Zm00001d003013_P001	Maize	cytosol	76.65	51.41
TraesCS2A01G380600.1	Wheat	cytosol	74.85	50.81
Zm00001d029127_P001	Maize	mitochondrion	68.26	50.22
TraesCS2D01G376900.1	Wheat	cytosol	73.65	50.0
Zm00001d025868_P002	Maize	cytosol	75.45	49.8
Bra017270.1-P	Field mustard	cytosol	63.47	49.77
EES11120	Sorghum	cytosol	76.65	49.42
HORVU2Hr1G089620.5	Barley	cytosol	76.65	48.67
TraesCS1D01G003500.1	Wheat	cytosol	69.46	48.54
Bra008924.1-P	Field mustard	cytosol	61.08	47.22
Bra011592.1-P	Field mustard	cytosol	65.87	47.01
EER94862	Sorghum	mitochondrion, plastid	61.08	46.58
Bra020803.1-P	Field mustard	cytosol	63.47	46.49
Bra023351.1-P	Field mustard	cytosol	59.88	46.08
TraesCS2B01G397600.2	Wheat	cytosol	74.85	44.64
Bra036562.1-P	Field mustard	cytosol	46.71	40.62
Bra028735.1-P	Field mustard	cytosol	23.95	31.75
TraesCS4D01G250200.1	Wheat	mitochondrion	20.96	30.97
Bra028736.1-P	Field mustard	nucleus	44.31	28.79
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	46.11	25.5

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EnsemblPlantsGene:Bra039788	EnsemblPlants:Bra039788.1	EnsemblPlants:Bra039788.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	UniProt:M4FFB5	PFAM:PF03641	PANTHER:PTHR31223
PANTHER:PTHR31223:SF17	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000254528F	:	:

Description

AT3G53450 (E=2e-075) | unknown protein

Coordinates

chrA04:+:3899059..3901479

Molecular Weight (calculated)

18180.7 Da

IEP (calculated)

5.253

GRAVY (calculated)

-0.209

Length

167 amino acids

Sequence
(BLAST)

001: MEVNNDTMQK SKFGRICVFC GSSQGKKGSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGI VSQVVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PEYSPCHESV ASKLCWEIER IGYSSED

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.