CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003013_P001	Maize	cytosol	84.94	88.35
Os04t0518800-01	Rice	cytosol	83.78	86.8
TraesCS2A01G380600.1	Wheat	cytosol	77.99	82.11
KRH22873	Soybean	cytosol	66.02	81.82
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	66.8	81.6
KRH26448	Soybean	cytosol	65.64	81.34
GSMUA_Achr6P36490_001	Banana	cytosol	67.95	81.11
TraesCS2D01G376900.1	Wheat	cytosol	76.83	80.89
Bra034399.1-P	Field mustard	cytosol	66.41	80.75
Solyc06g075090.2.1	Tomato	cytosol	59.07	80.1
VIT_08s0040g01780.t01	Wine grape	cytosol	67.18	79.82
Solyc09g007830.2.1	Tomato	cytosol	67.18	79.82
Bra011962.1-P	Field mustard	cytosol	65.64	79.81
Bra023107.1-P	Field mustard	cytosol	63.32	79.61
PGSC0003DMT400027157	Potato	cytosol	67.57	79.55
Bra017202.1-P	Field mustard	cytosol	64.48	79.52
EES05457	Sorghum	cytosol	74.9	79.51
PGSC0003DMT400055525	Potato	cytosol	66.8	79.36
GSMUA_Achr1P09040_001	Banana	cytosol	66.8	79.36
Solyc10g084150.1.1	Tomato	cytosol	67.18	79.09
KRH29895	Soybean	cytosol	66.8	78.64
Bra003135.1-P	Field mustard	cytosol	50.58	78.44
EER94070	Sorghum	mitochondrion	62.16	77.78
KRH67693	Soybean	cytosol	65.25	77.17
KRH19875	Soybean	cytosol	65.25	77.17
CDY44352	Canola	cytosol	60.23	76.85
CDY62895	Canola	cytosol	58.69	76.77
KRG95991	Soybean	cytosol	64.86	76.71
Bra039788.1-P	Field mustard	cytosol	49.42	76.65
Bra007000.1-P	Field mustard	cytosol	49.42	76.19
HORVU2Hr1G089620.5	Barley	cytosol	76.83	75.67
AT5G03270.1	Thale cress	cytosol	58.69	75.62
Zm00001d025868_P002	Maize	cytosol	72.2	73.91
KRH25030	Soybean	cytosol	66.41	73.82
PGSC0003DMT400020890	Potato	cytosol	63.71	72.37
TraesCS2B01G397600.2	Wheat	cytosol	77.22	71.43
Solyc11g069570.1.1	Tomato	cytosol	64.48	71.37
KRH15578	Soybean	cytosol	20.85	71.05
KRH15614	Soybean	cytosol, extracellular, plastid	18.92	71.01
TraesCS1D01G003500.1	Wheat	cytosol	63.71	69.04
KRH07771	Soybean	cytosol	19.3	68.49
KRH32483	Soybean	cytosol, golgi, mitochondrion	45.95	65.75
EER97131	Sorghum	cytosol	58.69	64.68
OQU88832	Sorghum	cytosol, plastid	55.98	63.6
EER94862	Sorghum	mitochondrion, plastid	52.51	62.1
EES03190	Sorghum	cytosol	57.53	59.36
EES18588	Sorghum	cytosol	52.51	58.87
EER93620	Sorghum	cytosol	49.81	55.6
KXG22670	Sorghum	plastid	55.21	55.0
OQU87402	Sorghum	plastid	52.12	51.33
EER93059	Sorghum	cytosol	35.14	50.0

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:8055819	UniProt:C5YCE0	EnsemblPlants:EES11120	ProteinID:EES11120
ProteinID:EES11120.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	ProteinID:OQU81986.1	ProteinID:OQU81987.1	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF28	EnsemblPlantsGene:SORBI_3006G149300	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001A86E1B
RefSeq:XP_002446792.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:51083274..51087226

Molecular Weight (calculated)

28671.7 Da

IEP (calculated)

4.889

GRAVY (calculated)

-0.211

Length

259 amino acids

Sequence
(BLAST)

001: MDAAEHHMEM EIKEEEEEEA AEVMDMTTTV LSPRFRRICV FCGSSQGKKK TYQDAAVELG QELVSRNIDL VYGGGSVGLM GLVSRAVYNG GRHVIGVIPK
101: TLMPREITGE TVGEVKAVAD MHQRKAEMAR QSDAFIALPG GYGTLEELLE VIAWAQLGIH DKPVGLLNVD GYYNSLLSFI DKAVEEEFIS PTARHIIVLA
201: PTPKELLDKL EEYSPQHEKV VPKTKWEMEQ LSYCKSCEIP PGLKEGKPVV IQAQRGAML

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.