CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95991	Soybean	cytosol	98.17	98.17
KRH19875	Soybean	cytosol	93.61	93.61
CDX91344	Canola	mitochondrion	81.28	89.45
Solyc10g084150.1.1	Tomato	cytosol	88.13	87.73
PGSC0003DMT400027157	Potato	cytosol	87.67	87.27
Solyc09g007830.2.1	Tomato	cytosol	86.76	87.16
PGSC0003DMT400055525	Potato	cytosol	86.76	87.16
CDX79722	Canola	cytosol	81.74	86.89
VIT_08s0040g01780.t01	Wine grape	cytosol	86.3	86.7
KRH07771	Soybean	cytosol	28.77	86.3
CDX73553	Canola	cytosol	77.17	85.79
Bra017202.1-P	Field mustard	cytosol	82.19	85.71
CDY52759	Canola	cytosol	84.02	85.58
Bra023107.1-P	Field mustard	cytosol	80.37	85.44
CDY46763	Canola	cytosol	80.37	85.44
KRH22873	Soybean	cytosol	80.82	84.69
GSMUA_Achr6P36490_001	Banana	cytosol	83.56	84.33
KRH26448	Soybean	cytosol	80.37	84.21
AT3G53450.1	Thale cress	cytosol	82.65	84.19
Bra003135.1-P	Field mustard	cytosol	63.93	83.83
CDY30875	Canola	cytosol	81.74	83.26
KRH29895	Soybean	cytosol	83.56	83.18
CDX76213	Canola	cytosol	76.26	82.67
Bra007000.1-P	Field mustard	cytosol	62.56	81.55
Bra039788.1-P	Field mustard	cytosol	62.1	81.44
GSMUA_Achr1P09040_001	Banana	cytosol	79.45	79.82
TraesCS1D01G154700.1	Wheat	mitochondrion	75.8	79.81
TraesCS1B01G173200.1	Wheat	mitochondrion	75.8	79.81
TraesCS1A01G156100.1	Wheat	mitochondrion	75.34	79.33
Zm00001d014016_P001	Maize	mitochondrion, nucleus	74.43	78.74
CDX74979	Canola	cytosol	82.19	78.6
KRH25030	Soybean	cytosol	83.56	78.54
KRH32483	Soybean	cytosol, golgi, mitochondrion	64.38	77.9
EER94070	Sorghum	mitochondrion	73.52	77.78
AT2G37210.2	Thale cress	cytosol	82.65	75.73
CDX78180	Canola	cytosol	82.65	75.1
TraesCS4D01G250300.1	Wheat	mitochondrion	23.29	75.0
TraesCS4B01G250400.1	Wheat	mitochondrion	69.41	74.15
KRH15614	Soybean	cytosol, extracellular, plastid	23.29	73.91
TraesCS4A01G413200.1	Wheat	mitochondrion	69.41	73.79
KRG96247	Soybean	cytosol	71.69	73.71
KRH67989	Soybean	cytosol	71.69	73.71
TraesCS4D01G310800.1	Wheat	mitochondrion	68.95	73.66
TraesCS4A01G054500.1	Wheat	mitochondrion	22.83	73.53
KRH32819	Soybean	cytosol	71.69	73.36
KRH05931	Soybean	cytosol	71.69	73.02
KRH72214	Soybean	cytosol	71.23	72.9
TraesCS4B01G313800.1	Wheat	mitochondrion	68.04	72.68
KRH51716	Soybean	cytosol	72.6	71.95
KRH17410	Soybean	cytosol	69.41	71.36
KRH61054	Soybean	cytosol	72.15	70.22
KRH15578	Soybean	cytosol	23.74	68.42
EES05457	Sorghum	cytosol	75.8	68.03
Zm00001d003013_P001	Maize	cytosol	75.34	66.27
Zm00001d029127_P001	Maize	mitochondrion	68.04	65.64
KRH32950	Soybean	cytosol	61.19	65.37
EES11120	Sorghum	cytosol	77.17	65.25
TraesCS2A01G380600.1	Wheat	cytosol	73.06	65.04
TraesCS2D01G376900.1	Wheat	cytosol	73.06	65.04
KRH52208	Soybean	cytosol	63.01	64.79
Zm00001d025868_P002	Maize	cytosol	74.43	64.43
KRH05430	Soybean	cytosol	62.56	63.43
TraesCS1D01G003500.1	Wheat	cytosol	68.49	62.76
KRH39935	Soybean	cytosol	63.47	62.33
KRH61527	Soybean	cytosol	63.93	62.22
HORVU2Hr1G089620.5	Barley	cytosol	74.43	61.98
TraesCS4D01G250200.1	Wheat	mitochondrion	31.96	61.95
EER94862	Sorghum	mitochondrion, plastid	61.19	61.19
TraesCS2B01G397600.2	Wheat	cytosol	73.06	57.14
KRH32487	Soybean	cytosol	4.57	52.63
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	37.9	27.48

Protein Annotations

EntrezGene:100787375	MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:ACUP02002069	EMBL:BT094329	UniProt:C6TA03
EnsemblPlantsGene:GLYMA_03G181300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	EnsemblPlants:KRH67693	ProteinID:KRH67693	ProteinID:KRH67693.1	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001B15E7D

Description

hypothetical protein

Coordinates

chr3:-:39307119..39311433

Molecular Weight (calculated)

24013.9 Da

IEP (calculated)

6.306

GRAVY (calculated)

-0.159

Length

219 amino acids

Sequence
(BLAST)

001: MDTRSEMRHS KFKRICVFCG SSPGKKSTYQ DAAIELGNEL VSRNIDLVYG GGSIGLMGLV SQAVHDGGRH VIGVIPKTLM PRELTGETVG EVKAVADMHQ
101: RKAEMAKHSD AFIALPGGYG TLEELLEVIT WAQLGIHDKP VGLVNVDGYF NSLLSFIDKA VEEGFISPNA RHIIVSAPTA KELVKKLEDY VPCHEGVASK
201: LSWQIEQQLA YPQDYDMSR

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.