CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023107.1-P	Field mustard	cytosol	100.0	100.0
CDX79722	Canola	cytosol	97.57	97.57
CDX91344	Canola	mitochondrion	91.75	94.97
CDY13293	Canola	cytosol	52.91	92.37
CDX73553	Canola	cytosol	84.47	88.32
CDY52759	Canola	cytosol	91.26	87.44
CDY30875	Canola	cytosol	90.29	86.51
CDX76213	Canola	cytosol	83.98	85.64
CDX74979	Canola	cytosol	93.2	83.84
Solyc09g007830.2.1	Tomato	cytosol	87.86	83.03
PGSC0003DMT400055525	Potato	cytosol	87.86	83.03
Solyc10g084150.1.1	Tomato	cytosol	87.86	82.27
VIT_08s0040g01780.t01	Wine grape	cytosol	86.89	82.11
PGSC0003DMT400027157	Potato	cytosol	87.38	81.82
KRG95991	Soybean	cytosol	86.41	81.28
KRH19875	Soybean	cytosol	85.92	80.82
AT2G37210.2	Thale cress	cytosol	93.69	80.75
KRH67693	Soybean	cytosol	85.44	80.37
CDX77168	Canola	cytosol	82.52	79.81
CDY30498	Canola	cytosol	82.52	79.81
CDX71364	Canola	cytosol	81.55	78.87
CDY04551	Canola	cytosol	81.55	78.87
GSMUA_Achr6P36490_001	Banana	cytosol	83.01	78.8
CDY44352	Canola	cytosol	76.7	77.83
GSMUA_Achr1P09040_001	Banana	cytosol	82.04	77.52
CDY62895	Canola	cytosol	74.27	77.27
CDX78180	Canola	cytosol	90.29	77.18
CDY04985	Canola	cytosol	79.13	75.81
CDX69118	Canola	cytosol	72.33	66.52
CDY40411	Canola	cytosol	67.96	65.73
CDY32063	Canola	cytosol	66.5	64.32
CDY52642	Canola	cytosol	71.84	63.25
CDX79649	Canola	cytosol	56.8	63.24
CDX76318	Canola	cytosol	68.93	62.28
CDX69717	Canola	cytosol	62.62	59.72
CDX97157	Canola	cytosol	62.62	59.72
CDY19786	Canola	cytosol	54.85	59.16
CDX87066	Canola	cytosol	54.85	59.16
CDY65870	Canola	cytosol	62.62	58.9
CDX91185	Canola	cytosol	62.62	57.59
CDY17522	Canola	cytosol	62.14	55.9
CDY48150	Canola	mitochondrion	29.61	50.83

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:A0A078IC02	UniProt:A0A078IC02	EnsemblPlants:CDY46763	ProteinID:CDY46763
ProteinID:CDY46763.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00086089001	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000253FF93

Description

BnaA03g17070DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078IC02]

Coordinates

chrLK032684:-:118441..121119

Molecular Weight (calculated)

22412.2 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.073

Length

206 amino acids

Sequence
(BLAST)

001: MEIKAETMQK SKFKRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPKELTGETV GEVRAVTGMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHEK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPN AKELVKKLEE YAPCHESVTS
201: KLCWEM

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.