Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52642 | Canola | cytosol | 95.09 | 91.03 |
| CDX76318 | Canola | cytosol | 86.16 | 84.65 |
| AT4G35190.1 | Thale cress | cytosol | 84.38 | 82.89 |
| VIT_18s0001g00210.t01 | Wine grape | cytosol | 75.89 | 77.63 |
| CDY17522 | Canola | cytosol | 79.02 | 77.29 |
| VIT_03s0038g03420.t01 | Wine grape | cytosol | 78.12 | 76.42 |
| VIT_14s0036g00590.t01 | Wine grape | cytosol, extracellular | 26.79 | 75.0 |
| CDX91344 | Canola | mitochondrion | 66.07 | 74.37 |
| CDY46763 | Canola | cytosol | 66.52 | 72.33 |
| CDX79722 | Canola | cytosol | 66.52 | 72.33 |
| GSMUA_Achr2P03620_001 | Banana | cytosol | 70.54 | 72.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.73 | 71.78 |
| CDY44352 | Canola | cytosol | 64.29 | 70.94 |
| CDY04985 | Canola | cytosol | 67.86 | 70.7 |
| CDX73553 | Canola | cytosol | 62.05 | 70.56 |
| CDY13293 | Canola | cytosol | 37.05 | 70.34 |
| GSMUA_Achr1P07310_001 | Banana | cytosol, mitochondrion | 68.75 | 70.32 |
| GSMUA_Achr7P04070_001 | Banana | cytosol | 67.41 | 70.23 |
| CDY52759 | Canola | cytosol | 66.52 | 69.3 |
| CDY62895 | Canola | cytosol | 61.16 | 69.19 |
| CDY30498 | Canola | cytosol | 65.62 | 69.01 |
| CDX77168 | Canola | cytosol | 65.62 | 69.01 |
| CDY04551 | Canola | cytosol | 65.18 | 68.54 |
| CDX71364 | Canola | cytosol | 65.18 | 68.54 |
| CDY30875 | Canola | cytosol | 64.73 | 67.44 |
| Zm00001d021450_P001 | Maize | cytosol | 67.86 | 65.52 |
| CDX76213 | Canola | cytosol | 58.93 | 65.35 |
| CDX74979 | Canola | cytosol | 66.52 | 65.07 |
| EER97131 | Sorghum | cytosol | 67.86 | 64.68 |
| OQU88832 | Sorghum | cytosol, plastid | 65.18 | 64.04 |
| CDY40411 | Canola | cytosol | 60.71 | 63.85 |
| CDY32063 | Canola | cytosol | 59.82 | 62.91 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.2 | 62.75 |
| CDX78180 | Canola | cytosol | 66.07 | 61.41 |
| CDX97157 | Canola | cytosol | 57.59 | 59.72 |
| CDX69717 | Canola | cytosol | 57.59 | 59.72 |
| CDX79649 | Canola | cytosol | 48.66 | 58.92 |
| CDY19786 | Canola | cytosol | 50.0 | 58.64 |
| CDX87066 | Canola | cytosol | 50.0 | 58.64 |
| Os09t0547500-01 | Rice | cytosol, plastid | 59.38 | 58.59 |
| TraesCS5B01G348400.1 | Wheat | cytosol | 64.29 | 58.54 |
| TraesCS5A01G347500.1 | Wheat | cytosol | 63.39 | 57.96 |
| KRH32487 | Soybean | cytosol | 4.91 | 57.89 |
| TraesCS5A01G347400.1 | Wheat | cytosol | 63.39 | 57.72 |
| TraesCS5B01G348300.1 | Wheat | cytosol | 63.84 | 57.2 |
| TraesCS5D01G353600.1 | Wheat | cytosol | 62.95 | 56.63 |
| CDY65870 | Canola | cytosol | 55.36 | 56.62 |
| TraesCS5B01G348600.1 | Wheat | cytosol | 60.71 | 56.43 |
| CDX91185 | Canola | cytosol | 56.25 | 56.25 |
| CDY48150 | Canola | mitochondrion | 27.23 | 50.83 |
Protein Annotations
| EnsemblPlants:CDX69118 | EnsemblPlantsGene:GSBRNA2T00130904001 | Gene3D:3.40.50.450 | GO:A0A078C231 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF26 | PFAM:PF03641 | ProteinID:CDX69118 | ProteinID:CDX69118.1 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 |
| UniParc:UPI0001B83797 | MapMan:11.4.1.2 | : | : | : | : |
Description
BnaC01g03350D
Coordinates
chrLK031789:+:3027177..3028440
Molecular Weight (calculated)
24651.8 Da
IEP (calculated)
6.394
GRAVY (calculated)
-0.118
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTAMDKRIE TVKSRFKRVC VFCGSSSGNK DCYRDAAIDL AQELIERKLN LVYGGGSIGL MGLVSQAVHE AGGHVLGIIP RTLMDKEITG ETFGEVRAVA
101: DMHQRKAEMA SHSDCFIALP GGYGTLEELL EVITWAQLGI HDKPVGLLNV DGYYNDLLTF INKAVDDGFI KPSQRHIFVS APNAKELVQK LEAYEPVIDG
201: VISKSKWEVE KKVQHPQTTS CVLS
101: DMHQRKAEMA SHSDCFIALP GGYGTLEELL EVITWAQLGI HDKPVGLLNV DGYYNDLLTF INKAVDDGFI KPSQRHIFVS APNAKELVQK LEAYEPVIDG
201: VISKSKWEVE KKVQHPQTTS CVLS
001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
Arabidopsis Description
LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.