Factsheet for VIT_14s0036g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g03420.t01	Wine grape	cytosol	90.0	31.44
VIT_18s0001g00210.t01	Wine grape	cytosol	85.0	31.05
AT4G35190.1	Thale cress	cytosol	83.75	29.39
Bra011592.1-P	Field mustard	cytosol	81.25	27.78
CDY52642	Canola	cytosol	81.25	27.78
Bra020803.1-P	Field mustard	cytosol	77.5	27.19
CDX76318	Canola	cytosol	77.5	27.19
CDY17522	Canola	cytosol	77.5	27.07
GSMUA_Achr2P03620_001	Banana	cytosol	73.75	26.94
CDX69118	Canola	cytosol	75.0	26.79
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	71.25	26.03
GSMUA_AchrUn_...	Banana	cytosol	63.75	25.25
GSMUA_Achr7P04070_001	Banana	cytosol	66.25	24.65
VIT_08s0040g01780.t01	Wine grape	cytosol	66.25	24.31
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	63.75	24.06
Zm00001d021450_P001	Maize	cytosol	68.75	23.71
OQU88832	Sorghum	cytosol, plastid	67.5	23.68
GSMUA_AchrUn_...	Banana	cytosol	72.5	23.48
EER97131	Sorghum	cytosol	68.75	23.4
VIT_18s0001g14030.t01	Wine grape	mitochondrion	62.5	23.15
VIT_08s0007g02480.t01	Wine grape	cytosol	62.5	23.15
TraesCS5A01G347400.1	Wheat	cytosol	67.5	21.95
TraesCS5B01G348400.1	Wheat	cytosol	67.5	21.95
TraesCS5A01G347500.1	Wheat	cytosol	65.0	21.22
TraesCS5D01G353600.1	Wheat	cytosol	65.0	20.88
TraesCS5B01G348300.1	Wheat	cytosol	65.0	20.8
VIT_13s0064g00740.t01	Wine grape	cytosol	53.75	20.0
TraesCS5B01G348600.1	Wheat	cytosol	58.75	19.5
Os09t0547500-01	Rice	cytosol, plastid	55.0	19.38
VIT_06s0004g00590.t01	Wine grape	cytosol, mitochondrion	48.75	19.02
VIT_08s0007g08340.t01	Wine grape	cytosol	52.5	18.92
VIT_04s0008g01040.t01	Wine grape	cytosol	51.25	18.89
KRH32487	Soybean	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_14s0036g00590	EMBL:FN595241	EnsemblPlants:VIT_14s0036g00590.t01	EnsemblPlantsGene:VIT_14s0036g00590	Gene3D:3.40.50.450	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF26
PFAM:PF03641	ProteinID:CBI22380	ProteinID:CBI22380.3	SUPFAM:SSF102405	TMHMM:TMhelix	UniParc:UPI0001BE1DE1
UniProt:E0CUC2	MapMan:11.4.1.2	:	:	:	:

Description

No Description!

Coordinates

chr14:+:10550902..10551405

Molecular Weight (calculated)

9185.2 Da

IEP (calculated)

7.604

GRAVY (calculated)

-0.124

Length

80 amino acids

Sequence
(BLAST)

1: MTRHSDCLIA LPIGFLNVDG YYNYLLTFID KAVDDGFIKP SQRHIIVSAP NAKKLVQKLE EYVLVHDRVI AKARQEVEQQ

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.