CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97131	Sorghum	cytosol	91.23	88.51
Zm00001d021450_P001	Maize	cytosol	89.04	87.5
TraesCS5B01G348400.1	Wheat	cytosol	80.7	74.8
GSMUA_Achr2P03620_001	Banana	cytosol	71.05	73.97
TraesCS5A01G347400.1	Wheat	cytosol	79.39	73.58
GSMUA_AchrUn_...	Banana	cytosol	64.47	72.77
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	69.74	72.6
TraesCS5B01G348300.1	Wheat	cytosol	79.39	72.4
GSMUA_Achr7P04070_001	Banana	cytosol	67.98	72.09
TraesCS5D01G353600.1	Wheat	cytosol	78.51	71.89
VIT_18s0001g00210.t01	Wine grape	cytosol	67.54	70.32
TraesCS5A01G347500.1	Wheat	cytosol	75.44	70.2
EER94070	Sorghum	mitochondrion	62.72	69.08
TraesCS5B01G348600.1	Wheat	cytosol	72.81	68.88
Os09t0547500-01	Rice	cytosol, plastid	68.42	68.72
VIT_03s0038g03420.t01	Wine grape	cytosol	68.86	68.56
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	23.68	67.5
AT4G35190.1	Thale cress	cytosol	65.79	65.79
Bra020803.1-P	Field mustard	cytosol	65.35	65.35
CDX76318	Canola	cytosol	65.35	65.35
GSMUA_AchrUn_...	Banana	cytosol	70.61	65.18
CDX69118	Canola	cytosol	64.04	65.18
Bra011592.1-P	Field mustard	cytosol	66.67	64.96
CDY52642	Canola	cytosol	66.23	64.53
CDY17522	Canola	cytosol	59.21	58.95
EES05457	Sorghum	cytosol	62.28	58.2
EES11120	Sorghum	cytosol	63.6	55.98
EER94862	Sorghum	mitochondrion, plastid	53.51	55.71
EES03190	Sorghum	cytosol	59.21	53.78
KXG22670	Sorghum	plastid	59.65	52.31
EES18588	Sorghum	cytosol	52.63	51.95
EER93620	Sorghum	cytosol	50.0	49.14
EER93059	Sorghum	cytosol	39.04	48.9
OQU87402	Sorghum	plastid	53.51	46.39
KRH32487	Soybean	cytosol	3.07	36.84

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:A0A1W0W384	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	InterPro:LOG
InterPro:LOG_fam	EnsemblPlants:OQU88832	ProteinID:OQU88832	ProteinID:OQU88832.1	PFAM:PF03641	PANTHER:PTHR31223
PANTHER:PTHR31223:SF14	EnsemblPlantsGene:SORBI_3002G102900	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0009DC879E	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:11956981..11958721

Molecular Weight (calculated)

24349.0 Da

IEP (calculated)

4.864

GRAVY (calculated)

-0.139

Length

228 amino acids

Sequence
(BLAST)

001: MEGRAAVAEN GGEGKASDSS SRFRRLCVFC GSSSGKRSSY RDAAVARKVD LVYGGGSLGL MGQVSEAVHK GGGHVIGVIP TTLMGKEITG ETVGEVRAVA
101: GMHQRKAEMA RNSDAFIALP GGYGTLEEVL EVIAWSQLGI HSKPVGLLNV DGYYDFLLAF IDKAVDDGFV KPSQRHIFVS APDARELVQK LEEYEAVQDD
201: EDPAMPKLLW EMEQAGYNAS PLLAEIAG

Best Arabidopsis Sequence Match ( AT4G35190.2 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEVGTHQN IALLFVLRF

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.