CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039174_P001	Maize	plastid	85.77	84.15
Os05t0591600-01	Rice	cytosol	82.69	80.83
EES03190	Sorghum	cytosol	75.38	78.09
TraesCS1D01G444500.1	Wheat	cytosol	78.08	74.36
TraesCS1B01G471300.1	Wheat	cytosol, plastid	76.15	73.88
GSMUA_Achr8P04060_001	Banana	cytosol	62.31	71.68
KRG96247	Soybean	cytosol	58.46	71.36
KRH67989	Soybean	cytosol	58.46	71.36
GSMUA_Achr2P08380_001	Banana	cytosol	62.69	71.18
KRH32819	Soybean	cytosol	58.46	71.03
VIT_08s0007g02480.t01	Wine grape	cytosol	58.85	70.83
KRH72214	Soybean	cytosol	58.08	70.56
CDY04985	Canola	cytosol	58.08	70.23
AT5G06300.1	Thale cress	cytosol	58.08	69.59
Solyc10g082020.1.1	Tomato	cytosol	57.31	68.66
Solyc01g007270.1.1	Tomato	cytosol	18.46	68.57
EER94070	Sorghum	mitochondrion	53.08	66.67
HORVU1Hr1G094290.7	Barley	plastid	73.46	66.55
PGSC0003DMT400042349	Potato	cytosol	55.0	65.6
PGSC0003DMT400072345	Potato	cytosol	56.92	64.91
GSMUA_Achr6P35930_001	Banana	cytosol	55.38	64.57
EES05457	Sorghum	cytosol	57.69	61.48
EER97131	Sorghum	cytosol	54.23	60.0
OQU88832	Sorghum	cytosol, plastid	52.31	59.65
EER94862	Sorghum	mitochondrion, plastid	48.85	57.99
EES11120	Sorghum	cytosol	55.0	55.21
EER93620	Sorghum	cytosol	46.92	52.59
EES18588	Sorghum	cytosol	46.54	52.38
OQU87402	Sorghum	plastid	47.31	46.77
EER93059	Sorghum	cytosol	31.54	45.05
Bra028735.1-P	Field mustard	cytosol	16.54	34.13

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:A0A1B6PAC5	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlants:KXG22670
ProteinID:KXG22670	ProteinID:KXG22670.1	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223
PANTHER:PTHR31223:SF13	EnsemblPlantsGene:SORBI_3009G254900	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00081ADE23	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:58895368..58899870

Molecular Weight (calculated)

27366.8 Da

IEP (calculated)

5.384

GRAVY (calculated)

-0.015

Length

260 amino acids

Sequence
(BLAST)

001: MTPATVASEA PAPAPGLAAS STGTGTASRV EVSATATESA GNGSGGAERR SRFRRICVYC GSAKGKKPSY QDAAIQLGNQ LVERGIDLVY GGGSIGLMGS
101: VSHAVHAGGR HVMGIIPKSL MPREVTGEPV GEVRAVSGMH ERKAEMARFA DAFVALPGGY GTLEELLEII TWAQLGIHKK PVGLLNVDGF YDPLLSFIDL
201: AVNEGFITEA ARRIIISAPT AKELVMKLED YVPEYDIGLV WEEQKPNSLV PELESGITSS

Best Arabidopsis Sequence Match ( AT2G35990.1 )
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF

Arabidopsis Description

LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.