Factsheet for Solyc10g082020.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072345	Potato	cytosol	97.7	92.98
KRH72214	Soybean	cytosol	83.41	84.58
VIT_08s0007g02480.t01	Wine grape	cytosol	83.87	84.26
KRH32819	Soybean	cytosol	82.95	84.11
CDY04985	Canola	cytosol	82.95	83.72
KRH67989	Soybean	cytosol	82.03	83.57
KRG96247	Soybean	cytosol	81.57	83.1
AT5G06300.1	Thale cress	cytosol	82.49	82.49
Bra009182.1-P	Field mustard	cytosol	81.11	81.86
Solyc01g007270.1.1	Tomato	cytosol	26.27	81.43
Solyc09g007830.2.1	Tomato	cytosol	76.96	76.61
Solyc06g075090.2.1	Tomato	cytosol	66.36	75.39
Solyc10g084150.1.1	Tomato	cytosol	76.04	75.0
GSMUA_Achr8P04060_001	Banana	cytosol	74.19	71.24
Solyc04g081290.2.1	Tomato	cytosol	73.73	71.11
GSMUA_Achr2P08380_001	Banana	cytosol	73.73	69.87
Solyc11g069570.1.1	Tomato	cytosol	69.59	64.53
Os01t0588900-01	Rice	cytosol	70.51	63.22
TraesCS3A01G211100.1	Wheat	cytosol	66.82	61.97
TraesCS3B01G241600.1	Wheat	cytosol	67.74	61.51
Solyc08g062820.2.1	Tomato	cytosol	60.37	61.5
EES03190	Sorghum	cytosol	70.97	61.35
TraesCS3D01G213900.1	Wheat	cytosol	67.28	60.58
Solyc01g005680.2.1	Tomato	mitochondrion	56.68	60.29
GSMUA_Achr6P35930_001	Banana	cytosol	61.75	60.09
Zm00001d011246_P002	Maize	cytosol	69.12	58.82
Os05t0591600-01	Rice	cytosol	70.97	57.89
KXG22670	Sorghum	plastid	68.66	57.31
TraesCS1B01G471300.1	Wheat	cytosol, plastid	68.66	55.6
Zm00001d039174_P001	Maize	plastid	67.74	55.47
TraesCS1D01G444500.1	Wheat	cytosol	66.82	53.11
HORVU1Hr1G094290.7	Barley	plastid	67.74	51.22
Bra028736.1-P	Field mustard	nucleus	56.22	47.47
HORVU3Hr1G050770.10	Barley	mitochondrion	66.82	41.55
Zm00001d044327_P001	Maize	plastid	44.24	37.21

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:AB690819	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	UniProt:I0IUQ3	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF20	SUPFAM:SSF102405	EnsemblPlantsGene:Solyc10g082020.1	EnsemblPlants:Solyc10g082020.1.1
TIGRFAMs:TIGR00730	UniParc:UPI0002560408	SEG:seg	:	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Source:Projected from Arabidopsis thaliana (AT5G06300) UniProtKB/Swiss-Prot;Acc:Q8GW29]

Coordinates

chr10:+:62930029..62933540

Molecular Weight (calculated)

23926.9 Da

IEP (calculated)

5.173

GRAVY (calculated)

-0.129

Length

217 amino acids

Sequence
(BLAST)

001: MEKVESSKFN RICVFCGSSS GKKTSYQEAA IDLGKELVER RIDLVYGGGS VGLMGLVSQA VHDGGRHVLG VIPKTLMPRE LTGETIGELR AVSGMHQRKA
101: EMARQADAFI ALPGGYGTLE ELLEVITWAQ LGIHQKPVGL LNVEGYYNSL LSFIDKAVDE GFISPIARRI IVSAPTAKEL IRELEEHVPE KDEIISKLIW
201: EDEIQRYNYA PESTVPT

Best Arabidopsis Sequence Match ( AT5G06300.1 )
(BLAST)

001: MEETKSRFKR ICVFCGSSSG KKPSYQEAAI QLGNELVERR IDLVYGGGSV GLMGLVSQAV HHGGRHVLGV IPKTLMPREI TGETIGEVKA VADMHQRKAE
101: MARQADAFIA LPGGYGTLEE LLEVITWAQL GIHRKPVGLL NVDGYYNSLL TFIDKAVDEG FISPMARRII VSAPNAKELV RQLEEYEPEF DEITSKLVWD
201: EVDRISYVPG SEVATAT

Arabidopsis Description

LOG7Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.