Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011246_P002 | Maize | cytosol | 50.0 | 50.59 |
| VIT_08s0007g02480.t01 | Wine grape | cytosol | 40.31 | 48.15 |
| KRH32819 | Soybean | cytosol | 39.15 | 47.2 |
| CDY04985 | Canola | cytosol | 39.15 | 46.98 |
| Zm00001d014016_P001 | Maize | mitochondrion, nucleus | 37.6 | 46.86 |
| KRH72214 | Soybean | cytosol | 38.76 | 46.73 |
| KRG96247 | Soybean | cytosol | 38.37 | 46.48 |
| KRH67989 | Soybean | cytosol | 38.37 | 46.48 |
| AT5G06300.1 | Thale cress | cytosol | 38.76 | 46.08 |
| Solyc01g007270.1.1 | Tomato | cytosol | 12.4 | 45.71 |
| Solyc10g082020.1.1 | Tomato | cytosol | 37.21 | 44.24 |
| Zm00001d039174_P001 | Maize | plastid | 45.35 | 44.15 |
| PGSC0003DMT400042349 | Potato | cytosol | 36.05 | 42.66 |
| PGSC0003DMT400072345 | Potato | cytosol | 37.21 | 42.11 |
| Zm00001d021450_P001 | Maize | cytosol | 37.6 | 41.81 |
| Zm00001d029127_P001 | Maize | mitochondrion | 36.43 | 41.41 |
| Zm00001d025868_P002 | Maize | cytosol | 39.53 | 40.32 |
| Zm00001d003013_P001 | Maize | cytosol | 38.76 | 40.16 |
| Bra028735.1-P | Field mustard | cytosol | 19.38 | 39.68 |
| Zm00001d043692_P001 | Maize | cytosol | 34.5 | 37.4 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 33.33 | 36.44 |
| Zm00001d033605_P001 | Maize | cytosol | 29.46 | 31.93 |
Protein Annotations
| EMBL:BT087908 | EnsemblPlants:Zm00001d044327_P001 | EnsemblPlants:Zm00001d044327_T001 | EnsemblPlantsGene:Zm00001d044327 | EntrezGene:100283248 | Gene3D:3.40.50.450 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | InterPro:LOG_fam | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF13 |
| PFAM:PF03641 | ProteinID:ONM40888.1 | SEG:seg | SUPFAM:SSF102405 | UniParc:UPI0001A4C37B | UniProt:C4JAR1 |
| MapMan:11.4.1.2 | : | : | : | : | : |
Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7
Coordinates
chr3:-:225304006..225308415
Molecular Weight (calculated)
27816.2 Da
IEP (calculated)
7.533
GRAVY (calculated)
-0.246
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMDAAVAVK SGGGGAGSTG VTAAASQSPQ AATNGGERRS RFQRICVYCG SAKGRKPSYQ DAAVELGKEL GHPEILDAQR GHWRACWGSK GRLRHAREEG
101: RDGPLRRCLH SVTWYALCSM HCREGFGHTV GKKGFRVFDT RSLGLSAGGY GTLEELLEVI TWAQLGIHKK PVGLLNVDGF YDPLLSFIDM AVNEGFIKED
201: ARRIVISAPT AKELVLKLEE YVPEYEVGLV WEDQMPPSAA AAHGFAPELV EPGITSSS
101: RDGPLRRCLH SVTWYALCSM HCREGFGHTV GKKGFRVFDT RSLGLSAGGY GTLEELLEVI TWAQLGIHKK PVGLLNVDGF YDPLLSFIDM AVNEGFIKED
201: ARRIVISAPT AKELVLKLEE YVPEYEVGLV WEDQMPPSAA AAHGFAPELV EPGITSSS
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
Arabidopsis Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.