Factsheet for Zm00001d011246_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03190	Sorghum	cytosol	83.92	85.26
Os01t0588900-01	Rice	cytosol	80.39	84.71
TraesCS3A01G211100.1	Wheat	cytosol	73.33	79.91
TraesCS3D01G213900.1	Wheat	cytosol	74.12	78.42
TraesCS3B01G241600.1	Wheat	cytosol	73.33	78.24
VIT_08s0007g02480.t01	Wine grape	cytosol	62.75	74.07
Solyc01g007270.1.1	Tomato	cytosol	20.0	72.86
KRH32819	Soybean	cytosol	60.78	72.43
KRG96247	Soybean	cytosol	60.39	72.3
KRH67989	Soybean	cytosol	60.39	72.3
KRH72214	Soybean	cytosol	60.39	71.96
GSMUA_Achr8P04060_001	Banana	cytosol	62.35	70.35
CDY04985	Canola	cytosol	59.22	70.23
AT5G06300.1	Thale cress	cytosol	59.22	69.59
Solyc10g082020.1.1	Tomato	cytosol	58.82	69.12
Zm00001d014016_P001	Maize	mitochondrion, nucleus	56.08	69.08
PGSC0003DMT400042349	Potato	cytosol	58.43	68.35
Zm00001d039174_P001	Maize	plastid	70.98	68.3
GSMUA_Achr2P08380_001	Banana	cytosol	60.78	67.69
PGSC0003DMT400072345	Potato	cytosol	58.04	64.91
Zm00001d021450_P001	Maize	cytosol	56.86	62.5
GSMUA_Achr6P35930_001	Banana	cytosol	54.51	62.33
Zm00001d029127_P001	Maize	mitochondrion	55.29	62.11
Zm00001d003013_P001	Maize	cytosol	57.65	59.04
Zm00001d025868_P002	Maize	cytosol	57.65	58.1
Zm00001d043692_P001	Maize	cytosol	50.98	54.62
HORVU3Hr1G050770.10	Barley	mitochondrion	73.73	53.87
Zm00001d038862_P001	Maize	cytosol, extracellular	49.02	52.97
Zm00001d033605_P001	Maize	cytosol	47.45	50.84
Zm00001d044327_P001	Maize	plastid	50.59	50.0

Protein Annotations

EntrezGene:100191347	MapMan:11.4.1.2	Gene3D:3.40.50.450	ProteinID:AQK96329.1	ProteinID:AQK96330.1	UniProt:B4F8H8
EMBL:BT033416	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	GO:GO:0048509	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF13	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00017B63AA
EnsemblPlantsGene:Zm00001d011246	EnsemblPlants:Zm00001d011246_P002	EnsemblPlants:Zm00001d011246_T002	SEG:seg	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7

Coordinates

chr8:-:144409501..144413652

Molecular Weight (calculated)

26932.5 Da

IEP (calculated)

5.183

GRAVY (calculated)

0.035

Length

255 amino acids

Sequence
(BLAST)

001: MAMDAAVAEK TGGGGAAGVA AGAQVGLNGG GVGGGERRSR FHRICVYCGS AKGRKPSYQD AAVELGKELV ERGIDLVYGG GSIGLMGLVS HAVHDGGRHV
101: IGVIPRSLMP REVTGEPVGE VRAVSGMHER KAEMARFADA FIALPGGYGT LEEVLEVITW AQLGIHRKPV GLVNVDGFYD PLLSFIDMAV NEGFIKEDAR
201: RIVVSAPTAK ELVLKLEEYV PEYEVGLVWE DQMPAAELES PGSPPPRLWT SAALL

Best Arabidopsis Sequence Match ( AT2G35990.1 )
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF

Arabidopsis Description

LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.