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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
nucleus: 24677780
msms PMID: 24677780 doi
B Guo, Y Chen, C Li, T Wang, R Wang, B Wang, S Hu, X Du, H Xing, X Song, Y Yao, Q Sun, Z Ni
State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER94070 Sorghum mitochondrion 97.58 97.58
Os10t0479500-01 Rice mitochondrion 93.72 95.1
TraesCS1A01G156100.1 Wheat mitochondrion 92.27 91.83
TraesCS1B01G173200.1 Wheat mitochondrion 92.27 91.83
TraesCS1D01G154700.1 Wheat mitochondrion 92.27 91.83
VIT_06s0004g02680.t01 Wine grape cytosol, mitochondrion, nucleus 83.09 81.13
Bra023107.1-P Field mustard cytosol 78.74 79.13
Bra017202.1-P Field mustard cytosol 80.19 79.05
PGSC0003DMT400055525 Potato cytosol 82.61 78.44
Solyc09g007830.2.1 Tomato cytosol 82.61 78.44
GSMUA_Achr6P36490_001 Banana cytosol 81.64 77.88
CDY44352 Canola cytosol 75.85 77.34
Bra003135.1-P Field mustard cytosol 62.32 77.25
GSMUA_Achr1P09040_001 Banana cytosol 81.16 77.06
Solyc06g075090.2.1 Tomato cytosol 71.01 76.96
CDY62895 Canola cytosol 72.95 76.26
VIT_08s0040g01780.t01 Wine grape cytosol 80.19 76.15
Bra039788.1-P Field mustard cytosol 61.35 76.05
Solyc10g084150.1.1 Tomato cytosol 80.68 75.91
KRH22873 Soybean cytosol 76.33 75.6
PGSC0003DMT400027157 Potato cytosol 80.19 75.45
AT5G03270.1 Thale cress cytosol 72.95 75.12
KRH26448 Soybean cytosol 75.85 75.12
KRH29895 Soybean cytosol 79.71 75.0
Bra007000.1-P Field mustard cytosol 60.87 75.0
Bra011962.1-P Field mustard cytosol 76.81 74.65
Bra034399.1-P Field mustard cytosol 76.81 74.65
KRH67693 Soybean cytosol 78.74 74.43
KRH19875 Soybean cytosol 78.74 74.43
KRG95991 Soybean cytosol 78.74 74.43
KRH15578 Soybean cytosol 27.05 73.68
KRH25030 Soybean cytosol 79.71 70.82
KRH07771 Soybean cytosol 24.64 69.86
KRH15614 Soybean cytosol, extracellular, plastid 23.19 69.57
PGSC0003DMT400020890 Potato cytosol 76.33 69.3
Solyc11g069570.1.1 Tomato cytosol 78.26 69.23
Zm00001d029127_P001 Maize mitochondrion 75.85 69.16
Zm00001d003013_P001 Maize cytosol 78.26 65.06
Zm00001d025868_P002 Maize cytosol 77.78 63.64
Zm00001d021450_P001 Maize cytosol 70.53 62.93
KRH32483 Soybean cytosol, golgi, mitochondrion 53.14 60.77
Zm00001d011246_P002 Maize cytosol 69.08 56.08
Zm00001d038862_P001 Maize cytosol, extracellular 63.77 55.93
Zm00001d043692_P001 Maize cytosol 64.25 55.88
Zm00001d039174_P001 Maize plastid 67.63 52.83
Zm00001d033605_P001 Maize cytosol 59.9 52.1
Zm00001d044327_P001 Maize plastid 46.86 37.6
Protein Annotations
EntrezGene:100383171MapMan:11.4.1.2Gene3D:3.40.50.450ProteinID:AQK65044.1ProteinID:AQK65045.1EMBL:BT066453
UniProt:C0PDT4GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009691GO:GO:0009987GO:GO:0016787InterPro:LOGInterPro:LOG_famPFAM:PF03641
PANTHER:PTHR31223PANTHER:PTHR31223:SF17SUPFAM:SSF102405TIGRFAMs:TIGR00730UniParc:UPI000195C93FEnsemblPlantsGene:Zm00001d014016
EnsemblPlants:Zm00001d014016_P001EnsemblPlants:Zm00001d014016_T001::::
Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
Coordinates
chr5:-:28799932..28802306
Molecular Weight (calculated)
22807.6 Da
IEP (calculated)
5.601
GRAVY (calculated)
-0.072
Length
207 amino acids
Sequence
(BLAST)
001: MTMRQSRFKR ICVFCGSSQG KKRSYHDAAI ELGNELVARS VDLVYGGGSI GLMGLVSQAV YDGGRHVIGV IPKTLMTPEI SGETVGEVRA VADMHQRKAE
101: MARQSDAFIA LPGGYGTLEE LLEVITWAQL GIHHKPVGLL NVDGYYNSLL TFIDKAVEEG FINPSARRII VLAPTAQELM DKLEEYEPYH DMVASTLNWE
201: MGNLQGY
Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)
001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
Arabidopsis Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.