Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 7
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
24677780
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER94070 | Sorghum | mitochondrion | 97.58 | 97.58 |
Os10t0479500-01 | Rice | mitochondrion | 93.72 | 95.1 |
TraesCS1A01G156100.1 | Wheat | mitochondrion | 92.27 | 91.83 |
TraesCS1B01G173200.1 | Wheat | mitochondrion | 92.27 | 91.83 |
TraesCS1D01G154700.1 | Wheat | mitochondrion | 92.27 | 91.83 |
VIT_06s0004g02680.t01 | Wine grape | cytosol, mitochondrion, nucleus | 83.09 | 81.13 |
Bra023107.1-P | Field mustard | cytosol | 78.74 | 79.13 |
Bra017202.1-P | Field mustard | cytosol | 80.19 | 79.05 |
PGSC0003DMT400055525 | Potato | cytosol | 82.61 | 78.44 |
Solyc09g007830.2.1 | Tomato | cytosol | 82.61 | 78.44 |
GSMUA_Achr6P36490_001 | Banana | cytosol | 81.64 | 77.88 |
CDY44352 | Canola | cytosol | 75.85 | 77.34 |
Bra003135.1-P | Field mustard | cytosol | 62.32 | 77.25 |
GSMUA_Achr1P09040_001 | Banana | cytosol | 81.16 | 77.06 |
Solyc06g075090.2.1 | Tomato | cytosol | 71.01 | 76.96 |
CDY62895 | Canola | cytosol | 72.95 | 76.26 |
VIT_08s0040g01780.t01 | Wine grape | cytosol | 80.19 | 76.15 |
Bra039788.1-P | Field mustard | cytosol | 61.35 | 76.05 |
Solyc10g084150.1.1 | Tomato | cytosol | 80.68 | 75.91 |
KRH22873 | Soybean | cytosol | 76.33 | 75.6 |
PGSC0003DMT400027157 | Potato | cytosol | 80.19 | 75.45 |
AT5G03270.1 | Thale cress | cytosol | 72.95 | 75.12 |
KRH26448 | Soybean | cytosol | 75.85 | 75.12 |
KRH29895 | Soybean | cytosol | 79.71 | 75.0 |
Bra007000.1-P | Field mustard | cytosol | 60.87 | 75.0 |
Bra011962.1-P | Field mustard | cytosol | 76.81 | 74.65 |
Bra034399.1-P | Field mustard | cytosol | 76.81 | 74.65 |
KRH67693 | Soybean | cytosol | 78.74 | 74.43 |
KRH19875 | Soybean | cytosol | 78.74 | 74.43 |
KRG95991 | Soybean | cytosol | 78.74 | 74.43 |
KRH15578 | Soybean | cytosol | 27.05 | 73.68 |
KRH25030 | Soybean | cytosol | 79.71 | 70.82 |
KRH07771 | Soybean | cytosol | 24.64 | 69.86 |
KRH15614 | Soybean | cytosol, extracellular, plastid | 23.19 | 69.57 |
PGSC0003DMT400020890 | Potato | cytosol | 76.33 | 69.3 |
Solyc11g069570.1.1 | Tomato | cytosol | 78.26 | 69.23 |
Zm00001d029127_P001 | Maize | mitochondrion | 75.85 | 69.16 |
Zm00001d003013_P001 | Maize | cytosol | 78.26 | 65.06 |
Zm00001d025868_P002 | Maize | cytosol | 77.78 | 63.64 |
Zm00001d021450_P001 | Maize | cytosol | 70.53 | 62.93 |
KRH32483 | Soybean | cytosol, golgi, mitochondrion | 53.14 | 60.77 |
Zm00001d011246_P002 | Maize | cytosol | 69.08 | 56.08 |
Zm00001d038862_P001 | Maize | cytosol, extracellular | 63.77 | 55.93 |
Zm00001d043692_P001 | Maize | cytosol | 64.25 | 55.88 |
Zm00001d039174_P001 | Maize | plastid | 67.63 | 52.83 |
Zm00001d033605_P001 | Maize | cytosol | 59.9 | 52.1 |
Zm00001d044327_P001 | Maize | plastid | 46.86 | 37.6 |
Protein Annotations
EntrezGene:100383171 | MapMan:11.4.1.2 | Gene3D:3.40.50.450 | ProteinID:AQK65044.1 | ProteinID:AQK65045.1 | EMBL:BT066453 |
UniProt:C0PDT4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 | InterPro:LOG | InterPro:LOG_fam | PFAM:PF03641 |
PANTHER:PTHR31223 | PANTHER:PTHR31223:SF17 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI000195C93F | EnsemblPlantsGene:Zm00001d014016 |
EnsemblPlants:Zm00001d014016_P001 | EnsemblPlants:Zm00001d014016_T001 | : | : | : | : |
Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
Coordinates
chr5:-:28799932..28802306
Molecular Weight (calculated)
22807.6 Da
IEP (calculated)
5.601
GRAVY (calculated)
-0.072
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMRQSRFKR ICVFCGSSQG KKRSYHDAAI ELGNELVARS VDLVYGGGSI GLMGLVSQAV YDGGRHVIGV IPKTLMTPEI SGETVGEVRA VADMHQRKAE
101: MARQSDAFIA LPGGYGTLEE LLEVITWAQL GIHHKPVGLL NVDGYYNSLL TFIDKAVEEG FINPSARRII VLAPTAQELM DKLEEYEPYH DMVASTLNWE
201: MGNLQGY
101: MARQSDAFIA LPGGYGTLEE LLEVITWAQL GIHHKPVGLL NVDGYYNSLL TFIDKAVEEG FINPSARRII VLAPTAQELM DKLEEYEPYH DMVASTLNWE
201: MGNLQGY
001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
Arabidopsis Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.