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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30498 Canola cytosol 100.0 100.0
CDX77168 Canola cytosol 99.06 99.06
Bra011962.1-P Field mustard cytosol 96.24 96.24
AT2G28305.1 Thale cress cytosol 95.31 95.31
VIT_06s0004g02680.t01 Wine grape cytosol, mitochondrion, nucleus 86.39 86.79
KRH22873 Soybean cytosol 83.1 84.69
KRH26448 Soybean cytosol 82.63 84.21
KRH29895 Soybean cytosol 85.92 83.18
Bra023107.1-P Field mustard cytosol 79.81 82.52
Bra017202.1-P Field mustard cytosol 80.75 81.9
Solyc06g075090.2.1 Tomato cytosol 72.3 80.63
Bra003135.1-P Field mustard cytosol 62.44 79.64
KRH25030 Soybean cytosol 86.39 78.97
Bra039788.1-P Field mustard cytosol 61.5 78.44
Bra007000.1-P Field mustard cytosol 61.5 77.98
Zm00001d014016_P001 Maize mitochondrion, nucleus 74.65 76.81
EER94070 Sorghum mitochondrion 74.18 76.33
TraesCS1D01G154700.1 Wheat mitochondrion 74.18 75.96
TraesCS1B01G173200.1 Wheat mitochondrion 74.18 75.96
TraesCS1A01G156100.1 Wheat mitochondrion 74.18 75.96
TraesCS4A01G413200.1 Wheat mitochondrion 72.3 74.76
TraesCS4D01G310800.1 Wheat mitochondrion 71.83 74.63
TraesCS4B01G250400.1 Wheat mitochondrion 71.36 74.15
TraesCS4B01G313800.1 Wheat mitochondrion 70.89 73.66
TraesCS4D01G250300.1 Wheat mitochondrion 23.47 73.53
PGSC0003DMT400020890 Potato cytosol 78.4 73.25
Bra009182.1-P Field mustard cytosol 73.71 73.02
Solyc11g069570.1.1 Tomato cytosol 79.34 72.22
TraesCS4A01G054500.1 Wheat mitochondrion 23.0 72.06
KRH32483 Soybean cytosol, golgi, mitochondrion 59.15 69.61
Zm00001d003013_P001 Maize cytosol 79.81 68.27
TraesCS2D01G376900.1 Wheat cytosol 78.4 67.89
TraesCS2A01G380600.1 Wheat cytosol 77.93 67.48
EES11120 Sorghum cytosol 80.75 66.41
EES05457 Sorghum cytosol 76.06 66.39
Bra017270.1-P Field mustard cytosol 65.26 65.26
Zm00001d029127_P001 Maize mitochondrion 69.48 65.2
Bra011592.1-P Field mustard cytosol 70.42 64.1
Bra020803.1-P Field mustard cytosol 68.54 64.04
Zm00001d025868_P002 Maize cytosol 76.06 64.03
EER94862 Sorghum mitochondrion, plastid 65.73 63.93
Bra008924.1-P Field mustard cytosol 64.32 63.43
Bra023351.1-P Field mustard cytosol 64.32 63.13
TraesCS4D01G250200.1 Wheat mitochondrion 33.33 62.83
HORVU2Hr1G089620.5 Barley cytosol 77.0 62.36
TraesCS1D01G003500.1 Wheat cytosol 69.95 62.34
Bra036562.1-P Field mustard cytosol 54.93 60.94
TraesCS2B01G397600.2 Wheat cytosol 77.93 59.29
Bra028736.1-P Field mustard nucleus 52.11 43.19
Bra028735.1-P Field mustard cytosol 19.72 33.33
Os03t0697200-00 Rice nucleus 37.56 32.92
HORVU4Hr1G079860.4 Barley cytosol, nucleus 38.97 27.48
Protein Annotations
EnsemblPlants:Bra034399.1EnsemblPlants:Bra034399.1-PEnsemblPlantsGene:Bra034399Gene3D:3.40.50.450GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009691GO:GO:0009987GO:GO:0016787
InterPro:LOGInterPro:LOG_famPANTHER:PTHR31223PANTHER:PTHR31223:SF39PFAM:PF03641SEG:seg
SUPFAM:SSF102405TIGRFAMs:TIGR00730UniParc:UPI0001B8379CUniProt:M4F006MapMan:11.4.1.2:
Description
AT2G28305 (E=1e-106) | unknown protein
Coordinates
chrA04:+:12365282..12370316
Molecular Weight (calculated)
23170.0 Da
IEP (calculated)
6.248
GRAVY (calculated)
-0.039
Length
213 amino acids
Sequence
(BLAST)
001: MEIEPKFKRI CVFCGSSAGN KTSYRDAAIE LGAELVSRNI DLVYGGGSIG LMGLISQAVY NGGRHVIGVI PKTLMPKEIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDNAVEEGF ISPTARHIIV SAPSAKDLVK KLEEYVPRHE KVASKKSWEI
201: EQIGLSPTCE ISR
Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
Arabidopsis Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.