Factsheet for TraesCS4A01G413200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G310800.1	Wheat	mitochondrion	98.54	99.02
TraesCS4B01G313800.1	Wheat	mitochondrion	97.09	97.56
TraesCS4A01G054500.1	Wheat	mitochondrion	32.04	97.06
Os03t0109300-01	Rice	mitochondrion	84.47	82.46
TraesCS1A01G156100.1	Wheat	mitochondrion	78.64	77.88
Bra023107.1-P	Field mustard	cytosol	74.76	74.76
Bra017202.1-P	Field mustard	cytosol	75.73	74.29
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	76.21	74.06
AT5G03270.1	Thale cress	cytosol	71.36	73.13
Solyc09g007830.2.1	Tomato	cytosol	76.7	72.48
PGSC0003DMT400055525	Potato	cytosol	76.7	72.48
CDY44352	Canola	cytosol	71.36	72.41
Bra034399.1-P	Field mustard	cytosol	74.76	72.3
Bra003135.1-P	Field mustard	cytosol	58.25	71.86
KRH29895	Soybean	cytosol	76.21	71.36
Bra011962.1-P	Field mustard	cytosol	73.79	71.36
CDY62895	Canola	cytosol	68.45	71.21
Solyc06g075090.2.1	Tomato	cytosol	66.02	71.2
VIT_08s0040g01780.t01	Wine grape	cytosol	75.24	71.1
KRH15578	Soybean	cytosol	26.21	71.05
KRH22873	Soybean	cytosol	71.84	70.81
GSMUA_Achr6P36490_001	Banana	cytosol	74.27	70.51
Solyc10g084150.1.1	Tomato	cytosol	75.24	70.45
KRH26448	Soybean	cytosol	71.36	70.33
Bra007000.1-P	Field mustard	cytosol	57.28	70.24
Bra039788.1-P	Field mustard	cytosol	56.8	70.06
PGSC0003DMT400027157	Potato	cytosol	74.76	70.0
KRG95991	Soybean	cytosol	74.27	69.86
KRH67693	Soybean	cytosol	73.79	69.41
GSMUA_Achr1P09040_001	Banana	cytosol	73.3	69.27
KRH19875	Soybean	cytosol	73.3	68.95
KRH25030	Soybean	cytosol	76.7	67.81
Zm00001d029127_P001	Maize	mitochondrion	73.79	66.96
EER94862	Sorghum	mitochondrion, plastid	70.87	66.67
KRH15614	Soybean	cytosol, extracellular, plastid	21.84	65.22
Solyc11g069570.1.1	Tomato	cytosol	72.33	63.68
PGSC0003DMT400020890	Potato	cytosol	70.39	63.6
KRH07771	Soybean	cytosol	22.33	63.01
TraesCS2A01G380600.1	Wheat	cytosol	71.84	60.16
TraesCS1A01G362500.1	Wheat	cytosol	59.71	57.21
TraesCS3A01G211100.1	Wheat	cytosol	64.08	56.41
KRH32483	Soybean	cytosol, golgi, mitochondrion	49.51	56.35
TraesCS3A01G251500.1	Wheat	plastid	59.71	53.71
TraesCS4A01G317900.1	Wheat	plastid	63.59	53.47
TraesCS5A01G347500.1	Wheat	cytosol	63.59	53.47
TraesCS5A01G347400.1	Wheat	cytosol	63.11	52.85
TraesCS4A01G318100.1	Wheat	plastid	63.59	52.82
TraesCS4A01G277200.1	Wheat	cytosol	56.8	52.7

Protein Annotations

EnsemblPlants:TraesCS4A01G413200.1	EnsemblPlantsGene:TraesCS4A01G413200	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF40	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr4A:+:684532783..684536593

Molecular Weight (calculated)

22489.2 Da

IEP (calculated)

5.024

GRAVY (calculated)

0.052

Length

206 amino acids

Sequence
(BLAST)

001: MRQQASRFKR MCVFCGSSQG NKSSYHDAAI DLANQLVGGG IDLVYGGGSI GLMGLVSQAV YHGGRHVIGV IPKTLMTPEI VGEMVGEVRP VGDMHQRKAQ
101: MASLSDAFIA LPGGYGTLEE LLEVITWAQL GIHHKPVGLL NVEGYYDSLL TFIDQAVEEG FISPAARRII VSAPTAHQLM EKLEEYVPYY EMVASGLDWE
201: TDRLDF

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.