Factsheet for TraesCS3A01G251500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G251900.1	Wheat	cytosol	97.82	99.11
TraesCS3B01G281000.1	Wheat	cytosol	96.07	97.35
Os01t0708500-01	Rice	mitochondrion	86.03	88.34
Zm00001d043692_P001	Maize	cytosol	81.66	78.57
TraesCS1A01G362500.1	Wheat	cytosol	73.36	78.14
GSMUA_Achr3P25920_001	Banana	cytosol	70.31	75.23
OQU87402	Sorghum	plastid	83.84	73.0
VIT_04s0008g01040.t01	Wine grape	cytosol	69.0	72.81
KRH52208	Soybean	cytosol	64.63	69.48
PGSC0003DMT400021223	Potato	cytosol	64.63	69.48
Solyc08g062820.2.1	Tomato	cytosol	64.63	69.48
KRH05430	Soybean	cytosol	64.19	68.06
AT5G11950.1	Thale cress	cytosol	63.32	67.13
KRH61527	Soybean	cytosol	65.07	66.22
HORVU3Hr1G066810.9	Barley	mitochondrion	80.35	65.95
Bra023351.1-P	Field mustard	cytosol	62.45	65.9
CDX97157	Canola	cytosol	61.57	65.28
Bra008924.1-P	Field mustard	cytosol	61.57	65.28
CDX69717	Canola	cytosol	61.57	65.28
CDY65870	Canola	cytosol	61.57	64.38
GSMUA_Achr2P08480_001	Banana	mitochondrion	70.74	64.03
TraesCS1A01G156100.1	Wheat	mitochondrion	58.08	63.94
Bra036562.1-P	Field mustard	cytosol	53.28	63.54
CDX87066	Canola	cytosol	52.84	63.35
CDY19786	Canola	cytosol	52.84	63.35
CDX91185	Canola	cytosol	61.57	62.95
TraesCS4A01G413200.1	Wheat	mitochondrion	53.71	59.71
TraesCS4A01G054500.1	Wheat	mitochondrion	17.03	57.35
TraesCS4A01G277200.1	Wheat	cytosol	54.15	55.86
CDY48150	Canola	mitochondrion	29.26	55.83
TraesCS2A01G380600.1	Wheat	cytosol	58.52	54.47
AT5G26140.2	Thale cress	cytosol	38.43	53.66
TraesCS3A01G211100.1	Wheat	cytosol	52.84	51.71
TraesCS4A01G317900.1	Wheat	plastid	54.59	51.02
TraesCS5A01G347400.1	Wheat	cytosol	54.59	50.81
TraesCS5A01G347500.1	Wheat	cytosol	54.15	50.61
TraesCS4A01G318100.1	Wheat	plastid	53.28	49.19

Protein Annotations

EnsemblPlants:TraesCS3A01G251500.1	EnsemblPlantsGene:TraesCS3A01G251500	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF4	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr3A:+:471355335..471357371

Molecular Weight (calculated)

24222.1 Da

IEP (calculated)

4.547

GRAVY (calculated)

0.040

Length

229 amino acids

Sequence
(BLAST)

001: MGDTTAAASA PAPPRKFGRI CVFCGSNSGN RAVFGDAALE LGQGLVTRGV DLVYGGGSIG LMGLIAQTVL DGGCHVLGVI PRALMPLEIS GASVGEVKIV
101: SDMHERKAEM ARQADAFIAL PGGYGTMEEL LEMITWSQLG IHDKPVGLLN VDGYYDPLLA LFDKGAAEGF IKADCRQIIV SAPTADELLT KMEQYTRSHR
201: EVASRTSWEM TELGYGKAAP EPEEEAASC

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.