Factsheet for AT5G26140.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48150	Canola	mitochondrion	49.39	67.5
Bra036562.1-P	Field mustard	cytosol	58.54	50.0
AT5G11950.1	Thale cress	cytosol	64.63	49.07
CDY19786	Canola	cytosol	56.1	48.17
CDX87066	Canola	cytosol	56.1	48.17
KRH52208	Soybean	cytosol	59.76	46.01
KRH05430	Soybean	cytosol	59.76	45.37
VIT_04s0008g01040.t01	Wine grape	cytosol	59.15	44.7
Solyc08g062820.2.1	Tomato	cytosol	57.93	44.6
KRH61527	Soybean	cytosol	60.98	44.44
PGSC0003DMT400021223	Potato	cytosol	57.32	44.13
GSMUA_Achr3P25920_001	Banana	cytosol	53.05	40.65
TraesCS3B01G281000.1	Wheat	cytosol	53.66	38.94
TraesCS3D01G251900.1	Wheat	cytosol	53.66	38.94
TraesCS1B01G379700.1	Wheat	cytosol	50.61	38.6
TraesCS1A01G362500.1	Wheat	cytosol	50.61	38.6
Os01t0708500-01	Rice	mitochondrion	52.44	38.56
TraesCS3A01G251500.1	Wheat	plastid	53.66	38.43
TraesCS1D01G367400.1	Wheat	cytosol	50.0	38.14
AT2G28305.1	Thale cress	cytosol	49.39	38.03
AT5G03270.1	Thale cress	cytosol	45.73	37.31
AT3G53450.1	Thale cress	cytosol	48.78	37.21
Os05t0541200-01	Rice	cytosol, plasma membrane	50.0	36.77
GSMUA_Achr2P08480_001	Banana	mitochondrion	54.88	35.57
AT5G06300.1	Thale cress	cytosol	46.95	35.48
Zm00001d043692_P001	Maize	cytosol	51.22	35.29
EES18588	Sorghum	cytosol	48.78	34.63
Zm00001d038862_P001	Maize	cytosol, extracellular	49.39	34.32
AT2G37210.2	Thale cress	cytosol	48.17	33.05
AT4G35190.1	Thale cress	cytosol	45.73	32.89
AT2G35990.1	Thale cress	cytosol	42.68	32.86
OQU87402	Sorghum	plastid	52.44	32.7
HORVU3Hr1G066810.9	Barley	mitochondrion	53.05	31.18
HORVU1Hr1G079570.13	Barley	plastid	51.22	29.58

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:832683	UniProt:A0A1P8BH85	ProteinID:ANM70960.1	ArrayExpress:AT5G26140
EnsemblPlantsGene:AT5G26140	RefSeq:AT5G26140	TAIR:AT5G26140	RefSeq:AT5G26140-TAIR-G	EnsemblPlants:AT5G26140.2	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	Symbol:LOG9
InterPro:LOG_fam	RefSeq:NP_001332527.1	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF4	SUPFAM:SSF102405
UniParc:UPI00084959CB	:	:	:	:	:

Description

LOG9Putative lysine decarboxylase family protein [Source:TAIR;Acc:AT5G26140]

Coordinates

chr5:+:9130504..9131636

Molecular Weight (calculated)

18595.2 Da

IEP (calculated)

4.750

GRAVY (calculated)

-0.250

Length

164 amino acids

Sequence
(BLAST)

001: MHIEHISGET VGEVRIVSDM HERKATMAQE AGAFIALLGE FSYSKFLASF ESLQNDDGFL RRYETMEELL EMITWAQLGI HKKTVGLLNV DGYYNNLLAF
101: FDTGVEEGFI KQGACNIVVS APSARELMEK MELYTPSHKY IASHQSWKVE PLGDYPLLNE NKPQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.