Factsheet for TraesCS3D01G251900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G281000.1	Wheat	cytosol	98.23	98.23
TraesCS3A01G251500.1	Wheat	plastid	99.11	97.82
Os01t0708500-01	Rice	mitochondrion	87.17	88.34
TraesCS1D01G367400.1	Wheat	cytosol	74.78	78.6
Zm00001d043692_P001	Maize	cytosol	82.74	78.57
GSMUA_Achr3P25920_001	Banana	cytosol	70.35	74.3
OQU87402	Sorghum	plastid	84.96	73.0
VIT_04s0008g01040.t01	Wine grape	cytosol	69.47	72.35
Solyc08g062820.2.1	Tomato	cytosol	65.04	69.01
PGSC0003DMT400021223	Potato	cytosol	65.04	69.01
KRH52208	Soybean	cytosol	65.04	69.01
KRH05430	Soybean	cytosol	64.6	67.59
AT5G11950.1	Thale cress	cytosol	63.72	66.67
HORVU3Hr1G066810.9	Barley	mitochondrion	81.42	65.95
KRH61527	Soybean	cytosol	65.49	65.78
Bra023351.1-P	Field mustard	cytosol	62.83	65.44
CDX69717	Canola	cytosol	61.95	64.81
Bra008924.1-P	Field mustard	cytosol	61.95	64.81
CDX97157	Canola	cytosol	61.95	64.81
CDY65870	Canola	cytosol	61.95	63.93
TraesCS1D01G154700.1	Wheat	mitochondrion	58.41	63.46
GSMUA_Achr2P08480_001	Banana	mitochondrion	70.8	63.24
Bra036562.1-P	Field mustard	cytosol	53.54	63.02
CDX87066	Canola	cytosol	53.1	62.83
CDY19786	Canola	cytosol	53.1	62.83
CDX91185	Canola	cytosol	61.95	62.5
TraesCS4D01G310800.1	Wheat	mitochondrion	53.98	59.51
TraesCS4D01G250300.1	Wheat	mitochondrion	16.81	55.88
CDY48150	Canola	mitochondrion	29.65	55.83
TraesCS4D01G033800.1	Wheat	cytosol	54.87	55.11
AT5G26140.2	Thale cress	cytosol	38.94	53.66
TraesCS2D01G376900.1	Wheat	cytosol	57.52	52.85
TraesCS4D01G250200.1	Wheat	mitochondrion	26.11	52.21
TraesCS5D01G568400.1	Wheat	plastid	53.54	51.49
TraesCS1D01G003500.1	Wheat	cytosol	54.42	51.46
TraesCS3D01G213900.1	Wheat	cytosol	53.98	50.62
TraesCS5D01G568500.1	Wheat	cytosol	54.42	49.6
TraesCS5D01G353600.1	Wheat	cytosol	54.42	49.4
TraesCS1D01G444500.1	Wheat	cytosol	56.64	46.89

Protein Annotations

EnsemblPlants:TraesCS3D01G251900.1	EnsemblPlantsGene:TraesCS3D01G251900	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF4	PFAM:PF03641	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2	:

Description

No Description!

Coordinates

chr3D:+:352784115..352786166

Molecular Weight (calculated)

24034.0 Da

IEP (calculated)

4.713

GRAVY (calculated)

0.023

Length

226 amino acids

Sequence
(BLAST)

001: MGDTTAAAPA PPRKFGRICV FCGSNSGNRA VFGDAALELG QGLVTRGVDL VYGGGSIGLM GLIAQTVLDG GCRVLGVIPR ALMPLEISGA SVGEVKIVSD
101: MHERKAEMAR QADAFIALPG GYGTMEELLE MITWSQLGIH DKPVGLLNVD GYYDPLLALF DKGAAEGFIK ADCRQIIVSA PTAHELLTKM EQYTRSHREV
201: ASRTSWEMTE LGYGKAAPEP EEEASC

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.