Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P25920_001 | Banana | cytosol | 74.31 | 87.85 |
| Solyc08g062820.2.1 | Tomato | cytosol | 62.85 | 74.65 |
| VIT_04s0008g01040.t01 | Wine grape | cytosol | 63.64 | 74.19 |
| PGSC0003DMT400021223 | Potato | cytosol | 62.45 | 74.18 |
| KRH52208 | Soybean | cytosol | 61.66 | 73.24 |
| Os01t0708500-01 | Rice | mitochondrion | 63.24 | 71.75 |
| TraesCS3D01G251900.1 | Wheat | cytosol | 63.24 | 70.8 |
| TraesCS3A01G251500.1 | Wheat | plastid | 64.03 | 70.74 |
| KRH05430 | Soybean | cytosol | 60.08 | 70.37 |
| TraesCS3B01G281000.1 | Wheat | cytosol | 62.85 | 70.35 |
| KRH61527 | Soybean | cytosol | 62.45 | 70.22 |
| TraesCS1B01G379700.1 | Wheat | cytosol | 59.29 | 69.77 |
| Bra023351.1-P | Field mustard | cytosol | 59.68 | 69.59 |
| TraesCS1A01G362500.1 | Wheat | cytosol | 58.89 | 69.3 |
| TraesCS1D01G367400.1 | Wheat | cytosol | 58.89 | 69.3 |
| Bra036562.1-P | Field mustard | cytosol | 52.57 | 69.27 |
| AT5G11950.1 | Thale cress | cytosol | 58.89 | 68.98 |
| CDX69717 | Canola | cytosol | 58.5 | 68.52 |
| Bra008924.1-P | Field mustard | cytosol | 58.5 | 68.52 |
| CDX97157 | Canola | cytosol | 58.5 | 68.52 |
| CDY65870 | Canola | cytosol | 59.29 | 68.49 |
| CDX87066 | Canola | cytosol | 51.38 | 68.06 |
| CDY19786 | Canola | cytosol | 51.38 | 68.06 |
| Os05t0541200-01 | Rice | cytosol, plasma membrane | 59.68 | 67.71 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 52.17 | 67.01 |
| Zm00001d043692_P001 | Maize | cytosol | 62.45 | 66.39 |
| CDX91185 | Canola | cytosol | 58.5 | 66.07 |
| EES18588 | Sorghum | cytosol | 60.08 | 65.8 |
| GSMUA_Achr3P29740_001 | Banana | cytosol, plastid | 51.38 | 65.66 |
| GSMUA_Achr6P36490_001 | Banana | cytosol | 55.73 | 64.98 |
| GSMUA_Achr1P09040_001 | Banana | cytosol | 55.73 | 64.68 |
| GSMUA_Achr8P31460_001 | Banana | cytosol | 52.96 | 63.51 |
| OQU87402 | Sorghum | plastid | 65.61 | 63.12 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 58.5 | 62.71 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 37.94 | 61.94 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 52.96 | 61.19 |
| GSMUA_Achr8P19190_001 | Banana | cytosol | 53.75 | 60.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.83 | 59.9 |
| GSMUA_Achr1P07310_001 | Banana | cytosol, mitochondrion | 50.99 | 58.9 |
| GSMUA_Achr2P03620_001 | Banana | cytosol | 50.59 | 58.45 |
| CDY48150 | Canola | mitochondrion | 27.67 | 58.33 |
| GSMUA_Achr8P04060_001 | Banana | cytosol | 50.59 | 56.64 |
| GSMUA_Achr2P08380_001 | Banana | cytosol | 50.99 | 56.33 |
| GSMUA_Achr7P04070_001 | Banana | cytosol | 47.43 | 55.81 |
| GSMUA_Achr2P00980_001 | Banana | cytosol | 54.15 | 55.47 |
| GSMUA_Achr4P03590_001 | Banana | plastid | 53.75 | 55.06 |
| AT5G26140.2 | Thale cress | cytosol | 35.57 | 54.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.99 | 52.23 |
| GSMUA_Achr6P35930_001 | Banana | cytosol | 44.66 | 50.67 |
| HORVU3Hr1G066810.9 | Barley | mitochondrion | 55.73 | 50.54 |
| HORVU1Hr1G079570.13 | Barley | plastid | 53.36 | 47.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P08480_001 | EnsemblPlants:GSMUA_Achr2T08480_001 | EnsemblPlantsGene:GSMUA_Achr2G08480_001 | Gene3D:3.40.50.450 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 |
| InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF4 | PFAM:PF03641 | SEG:seg |
| SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI000294F616 | UniProt:M0S689 | MapMan:11.4.1.2 | : |
Description
Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G08480_001]
Coordinates
chr2:+:12474818..12477171
Molecular Weight (calculated)
27877.7 Da
IEP (calculated)
7.611
GRAVY (calculated)
-0.140
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKGGEGWRK QRRRHSDLDS WLYPSLVLLS LVRSGRRRAM GDETSSKFKR ICVFCGSNSG NRTVFREAAL DLGHELVKRR IDLVYGGGSV GLMGLISQTV
101: YDGGCHVLGV IPKALVPLEI SGETVGEVKI VSDMHERKAE MARQSDAFIA LPGGFGTMEE VLEMITWSQL GIHDKPVGLL NVDGYYNSLF ALFDSGVEEG
201: FIKPACRHIV LSASNANELL EKMELYTPLH KEVAPKQSWE IAHLGYSKAP SSP
101: YDGGCHVLGV IPKALVPLEI SGETVGEVKI VSDMHERKAE MARQSDAFIA LPGGFGTMEE VLEMITWSQL GIHDKPVGLL NVDGYYNSLF ALFDSGVEEG
201: FIKPACRHIV LSASNANELL EKMELYTPLH KEVAPKQSWE IAHLGYSKAP SSP
001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
Arabidopsis Description
LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.