CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008924.1-P	Field mustard	cytosol	100.0	100.0
CDX97157	Canola	cytosol	98.61	98.61
AT5G11950.1	Thale cress	cytosol	92.13	92.13
CDY65870	Canola	cytosol	92.59	91.32
CDX91185	Canola	cytosol	91.2	87.95
CDY19786	Canola	cytosol	73.61	83.25
CDX87066	Canola	cytosol	73.61	83.25
KRH52208	Soybean	cytosol	79.63	80.75
VIT_04s0008g01040.t01	Wine grape	cytosol	80.09	79.72
Solyc08g062820.2.1	Tomato	cytosol	75.0	76.06
KRH61527	Soybean	cytosol	78.7	75.56
KRH05430	Soybean	cytosol	75.46	75.46
PGSC0003DMT400021223	Potato	cytosol	74.07	75.12
GSMUA_Achr3P25920_001	Banana	cytosol	68.98	69.63
CDY48150	Canola	mitochondrion	38.43	69.17
CDX91344	Canola	mitochondrion	62.5	67.84
TraesCS1B01G379700.1	Wheat	cytosol	64.81	65.12
TraesCS1A01G362500.1	Wheat	cytosol	64.81	65.12
CDY04551	Canola	cytosol	63.43	64.32
CDX71364	Canola	cytosol	63.43	64.32
CDX77168	Canola	cytosol	63.43	64.32
CDY30498	Canola	cytosol	63.43	64.32
TraesCS1D01G367400.1	Wheat	cytosol	63.89	64.19
Os01t0708500-01	Rice	mitochondrion	66.2	64.13
CDY44352	Canola	cytosol	60.19	64.04
CDY62895	Canola	cytosol	58.33	63.64
CDX79722	Canola	cytosol	60.65	63.59
CDY13293	Canola	cytosol	34.72	63.56
CDX73553	Canola	cytosol	57.41	62.94
CDY46763	Canola	cytosol	59.72	62.62
CDY52759	Canola	cytosol	62.04	62.33
TraesCS3D01G251900.1	Wheat	cytosol	64.81	61.95
Os05t0541200-01	Rice	cytosol, plasma membrane	63.89	61.88
TraesCS3A01G251500.1	Wheat	plastid	65.28	61.57
TraesCS3B01G281000.1	Wheat	cytosol	64.35	61.5
CDY04985	Canola	cytosol	61.11	61.4
CDY30875	Canola	cytosol	61.11	61.4
EES18588	Sorghum	cytosol	65.28	61.04
CDX76213	Canola	cytosol	56.94	60.89
Zm00001d038862_P001	Maize	cytosol, extracellular	65.28	59.75
CDX74979	Canola	cytosol	62.96	59.39
Zm00001d043692_P001	Maize	cytosol	65.28	59.24
GSMUA_Achr2P08480_001	Banana	mitochondrion	68.52	58.5
CDX69118	Canola	cytosol	59.72	57.59
CDY40411	Canola	cytosol	56.48	57.28
CDY32063	Canola	cytosol	55.56	56.34
CDX76318	Canola	cytosol	58.33	55.26
CDX78180	Canola	cytosol	61.57	55.19
CDY52642	Canola	cytosol	59.72	55.13
CDX79649	Canola	cytosol	46.76	54.59
OQU87402	Sorghum	plastid	65.74	53.99
CDY17522	Canola	cytosol	51.85	48.91
HORVU1Hr1G079570.13	Barley	plastid	59.72	45.42
HORVU3Hr1G066810.9	Barley	mitochondrion	55.09	42.65

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:A0A078BZB1	ProteinID:AFO66505.1	EnsemblPlants:CDX69717	ProteinID:CDX69717
ProteinID:CDX69717.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00135750001	UniProt:I7CDE6	InterPro:LOG
InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF4	SUPFAM:SSF102405	TIGRFAMs:TIGR00730
UniParc:UPI0001B83799	:	:	:	:	:

Description

BnaA10g20660DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:I7CDE6]

Coordinates

chrLK031790:-:1508790..1510708

Molecular Weight (calculated)

23783.6 Da

IEP (calculated)

5.848

GRAVY (calculated)

-0.222

Length

216 amino acids

Sequence
(BLAST)

001: MEENQRSRFK KVCVFCGSHS GNREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGFHVLG IIPKALMPIE ISGETVGEVR VVADMHERKA
101: AMAQESEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGI LNTDGYYNNL LALFDTGVQE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HKHVASHESW
201: NVEELGAYPG QQSNHQ

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.