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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46763 Canola cytosol 97.57 97.57
CDX91344 Canola mitochondrion 92.23 95.48
CDY13293 Canola cytosol 54.37 94.92
CDX73553 Canola cytosol 86.41 90.36
CDY52759 Canola cytosol 92.72 88.84
CDY30875 Canola cytosol 91.75 87.91
CDX76213 Canola cytosol 85.44 87.13
CDX74979 Canola cytosol 94.66 85.15
VIT_08s0040g01780.t01 Wine grape cytosol 88.35 83.49
Solyc09g007830.2.1 Tomato cytosol 88.35 83.49
PGSC0003DMT400055525 Potato cytosol 88.35 83.49
KRG95991 Soybean cytosol 87.86 82.65
Solyc10g084150.1.1 Tomato cytosol 87.86 82.27
KRH19875 Soybean cytosol 87.38 82.19
AT2G37210.2 Thale cress cytosol 95.15 82.01
PGSC0003DMT400027157 Potato cytosol 87.38 81.82
KRH67693 Soybean cytosol 86.89 81.74
GSMUA_Achr6P36490_001 Banana cytosol 84.47 80.18
CDY30498 Canola cytosol 82.52 79.81
CDX77168 Canola cytosol 82.52 79.81
CDY04551 Canola cytosol 81.55 78.87
CDX71364 Canola cytosol 81.55 78.87
CDY44352 Canola cytosol 77.67 78.82
GSMUA_Achr1P09040_001 Banana cytosol 83.01 78.44
CDX78180 Canola cytosol 91.75 78.42
CDY62895 Canola cytosol 75.24 78.28
CDY04985 Canola cytosol 80.1 76.74
CDX69118 Canola cytosol 72.33 66.52
CDY40411 Canola cytosol 68.45 66.2
CDY32063 Canola cytosol 66.99 64.79
CDX79649 Canola cytosol 57.28 63.78
CDY52642 Canola cytosol 71.84 63.25
CDX76318 Canola cytosol 68.93 62.28
CDX97157 Canola cytosol 63.59 60.65
CDX69717 Canola cytosol 63.59 60.65
CDY65870 Canola cytosol 63.59 59.82
CDX87066 Canola cytosol 54.37 58.64
CDY19786 Canola cytosol 54.37 58.64
CDX91185 Canola cytosol 63.59 58.48
CDY17522 Canola cytosol 62.14 55.9
CDY48150 Canola mitochondrion 29.13 50.0
Protein Annotations
EnsemblPlants:CDX79722EnsemblPlantsGene:GSBRNA2T00132539001Gene3D:3.40.50.450GO:A0A078CSJ7GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009691GO:GO:0009987InterPro:LOGInterPro:LOG_famPANTHER:PTHR31223
PANTHER:PTHR31223:SF17PFAM:PF03641ProteinID:CDX79722ProteinID:CDX79722.1SUPFAM:SSF102405TIGRFAMs:TIGR00730
UniParc:UPI0004EBF966MapMan:11.4.1.2::::
Description
BnaC03g20580D
Coordinates
chrLK031818:-:1907878..1910640
Molecular Weight (calculated)
22474.2 Da
IEP (calculated)
6.030
GRAVY (calculated)
-0.071
Length
206 amino acids
Sequence
(BLAST)
001: MEIKAETMQK SKFKRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHEK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCRESVTS
201: KLCWEM
Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)
001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
Arabidopsis Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.