CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79722	Canola	cytosol	95.48	92.23
CDY46763	Canola	cytosol	94.97	91.75
Bra017202.1-P	Field mustard	cytosol	95.48	90.48
CDY13293	Canola	cytosol	52.26	88.14
CDX73553	Canola	cytosol	85.43	86.29
CDY52759	Canola	cytosol	92.96	86.05
CDX74979	Canola	cytosol	98.49	85.59
CDY30875	Canola	cytosol	92.46	85.58
CDX76213	Canola	cytosol	85.93	84.65
PGSC0003DMT400055525	Potato	cytosol	91.46	83.49
Solyc09g007830.2.1	Tomato	cytosol	91.46	83.49
Solyc10g084150.1.1	Tomato	cytosol	90.45	81.82
PGSC0003DMT400027157	Potato	cytosol	89.95	81.36
KRH67693	Soybean	cytosol	89.45	81.28
KRG95991	Soybean	cytosol	89.45	81.28
KRH19875	Soybean	cytosol	88.94	80.82
VIT_08s0040g01780.t01	Wine grape	cytosol	88.44	80.73
CDY30498	Canola	cytosol	85.43	79.81
GSMUA_Achr6P36490_001	Banana	cytosol	86.93	79.72
CDX77168	Canola	cytosol	84.92	79.34
AT2G37210.2	Thale cress	cytosol	94.97	79.08
CDY04551	Canola	cytosol	84.42	78.87
CDX71364	Canola	cytosol	84.42	78.87
CDY44352	Canola	cytosol	79.4	77.83
CDY62895	Canola	cytosol	76.88	77.27
GSMUA_Achr1P09040_001	Banana	cytosol	84.42	77.06
CDX78180	Canola	cytosol	92.46	76.35
CDY04985	Canola	cytosol	80.9	74.88
CDY40411	Canola	cytosol	70.85	66.2
CDX69118	Canola	cytosol	74.37	66.07
CDX79649	Canola	cytosol	60.3	64.86
CDY32063	Canola	cytosol	69.35	64.79
CDX76318	Canola	cytosol	72.36	63.16
CDY52642	Canola	cytosol	73.87	62.82
CDX97157	Canola	cytosol	67.84	62.5
CDX69717	Canola	cytosol	67.84	62.5
CDY65870	Canola	cytosol	67.84	61.64
CDX91185	Canola	cytosol	67.84	60.27
CDX87066	Canola	cytosol	57.79	60.21
CDY19786	Canola	cytosol	57.79	60.21
CDY17522	Canola	cytosol	64.82	56.33
CDY48150	Canola	mitochondrion	31.16	51.67

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:A0A078DS44	EnsemblPlants:CDX91344	ProteinID:CDX91344	ProteinID:CDX91344.1
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00152630001
InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17	SUPFAM:SSF102405
TIGRFAMs:TIGR00730	UniParc:UPI0004EF38DC	:	:	:	:

Description

BnaC04g08060D

Coordinates

chrLK031867:-:129146..132113

Molecular Weight (calculated)

21623.2 Da

IEP (calculated)

5.945

GRAVY (calculated)

-0.020

Length

199 amino acids

Sequence
(BLAST)

001: MQMSRFKRIC VFCGSSQGKK SSYQDAAVEL GNELVSRNID LVYGGGSIGL MGLVSQAVHD GGRHVIGIIP KTLMPKELTG ETVGEVRAVA DMHQRKAEMA
101: KHSDAFIALP GGYGTLEELL EVITWAQLGI HEKPVGLLNV DGYYNSLLSF IDKAVEEGFI SPTAREIIVS APTAKELVKK LEEYAPCHES VASKLCWET

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.