CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007000.1-P	Field mustard	cytosol	69.29	99.4
CDY52759	Canola	cytosol	87.14	97.67
CDY13293	Canola	cytosol	47.72	97.46
CDX76213	Canola	cytosol	80.91	96.53
CDX73553	Canola	cytosol	78.84	96.45
CDY30875	Canola	cytosol	85.89	96.28
AT3G53450.1	Thale cress	cytosol	85.48	95.81
CDX91344	Canola	mitochondrion	76.35	92.46
CDX79722	Canola	cytosol	78.42	91.75
CDY46763	Canola	cytosol	77.18	90.29
Solyc09g007830.2.1	Tomato	cytosol	77.59	85.78
PGSC0003DMT400055525	Potato	cytosol	77.59	85.78
PGSC0003DMT400027157	Potato	cytosol	77.59	85.0
Solyc10g084150.1.1	Tomato	cytosol	76.35	83.64
KRG95991	Soybean	cytosol	75.93	83.56
VIT_08s0040g01780.t01	Wine grape	cytosol	75.52	83.49
GSMUA_Achr6P36490_001	Banana	cytosol	75.1	83.41
KRH19875	Soybean	cytosol	75.52	83.11
KRH67693	Soybean	cytosol	75.1	82.65
CDX74979	Canola	cytosol	78.42	82.53
CDY30498	Canola	cytosol	71.78	81.22
GSMUA_Achr1P09040_001	Banana	cytosol	73.44	81.19
CDY04551	Canola	cytosol	70.95	80.28
CDX71364	Canola	cytosol	70.95	80.28
CDX77168	Canola	cytosol	70.95	80.28
CDY44352	Canola	cytosol	65.56	77.83
CDY62895	Canola	cytosol	63.49	77.27
CDY04985	Canola	cytosol	68.46	76.74
CDY40411	Canola	cytosol	58.51	66.2
CDX69118	Canola	cytosol	61.41	66.07
CDX79649	Canola	cytosol	49.38	64.32
CDY32063	Canola	cytosol	56.85	64.32
CDY52642	Canola	cytosol	61.0	62.82
CDX76318	Canola	cytosol	58.92	62.28
CDY65870	Canola	cytosol	56.43	62.1
CDX69717	Canola	cytosol	55.19	61.57
CDX97157	Canola	cytosol	55.19	61.57
CDX91185	Canola	cytosol	56.43	60.71
CDX87066	Canola	cytosol	46.47	58.64
CDY19786	Canola	cytosol	46.47	58.64
CDY17522	Canola	cytosol	52.28	55.02
CDY48150	Canola	mitochondrion	25.73	51.67

Protein Annotations

EnsemblPlants:CDX78180	EnsemblPlantsGene:GSBRNA2T00129486001	Gene3D:3.40.50.450	GO:A0A078CMS5	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF17	PFAM:PF03641	ProteinID:CDX78180	ProteinID:CDX78180.1	SUPFAM:SSF102405	TIGRFAMs:TIGR00730
UniParc:UPI0004EDDEBC	MapMan:11.4.1.2	:	:	:	:

Description

BnaA09g33750D

Coordinates

chrLK031814:-:1554152..1556579

Molecular Weight (calculated)

26473.1 Da

IEP (calculated)

7.566

GRAVY (calculated)

-0.025

Length

241 amino acids

Sequence
(BLAST)

001: MEVNTKTIIQ KSKFGRICVF CGSSQGKKSS YQDAAVDLGN ELVSRNIDLV YGGGSIGLMG FVSQAVHDGG RHVIGVIPKT LMPRELTGET VGEVRAVADM
101: HQRKAEMARH SDAFIALPGG KKHWVKHVVL VRLKLYNVKA ILLCGYGTLE ELLEVITWAQ LGIHDKPVGL LNVDGYYNSL LSFIDKAVEE GFISPSARQI
201: IISAPTAKEL VKKLEEYSPC HESVASKLCW EIERIGYSSE D

Best Arabidopsis Sequence Match ( AT2G37210.2 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPEEN NLVKLKNMLS WSSCSVKATL KSGYGTLEEL LEVITWAQLG IHDKPVGLLN VDGYYNSLLS FIDKAVEEGF ISPTAREIIV
201: SAPTAKELVK KLEEYAPCHE RVATKLCWEM ERIGYSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.