CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003135.1-P	Field mustard	cytosol	77.67	100.0
CDY13293	Canola	cytosol	54.88	100.0
AT3G53450.1	Thale cress	cytosol	97.21	97.21
CDX76213	Canola	cytosol	91.16	97.03
CDY30875	Canola	cytosol	96.28	96.28
CDX73553	Canola	cytosol	86.98	94.92
CDX91344	Canola	mitochondrion	86.05	92.96
CDX79722	Canola	cytosol	88.84	92.72
CDY46763	Canola	cytosol	87.44	91.26
CDX78180	Canola	cytosol	97.67	87.14
Solyc09g007830.2.1	Tomato	cytosol	87.91	86.7
PGSC0003DMT400055525	Potato	cytosol	87.91	86.7
PGSC0003DMT400027157	Potato	cytosol	87.91	85.91
GSMUA_Achr6P36490_001	Banana	cytosol	86.05	85.25
KRG95991	Soybean	cytosol	86.51	84.93
Solyc10g084150.1.1	Tomato	cytosol	86.51	84.55
KRH19875	Soybean	cytosol	85.58	84.02
KRH67693	Soybean	cytosol	85.58	84.02
VIT_08s0040g01780.t01	Wine grape	cytosol	85.12	83.94
GSMUA_Achr1P09040_001	Banana	cytosol	83.26	82.11
CDX74979	Canola	cytosol	87.44	82.1
CDY30498	Canola	cytosol	80.93	81.69
CDX71364	Canola	cytosol	80.0	80.75
CDY04551	Canola	cytosol	80.0	80.75
CDX77168	Canola	cytosol	80.0	80.75
CDY44352	Canola	cytosol	74.42	78.82
CDY62895	Canola	cytosol	72.09	78.28
CDY04985	Canola	cytosol	77.67	77.67
CDY40411	Canola	cytosol	66.51	67.14
CDX69118	Canola	cytosol	69.3	66.52
CDY32063	Canola	cytosol	64.65	65.26
CDX79649	Canola	cytosol	55.81	64.86
CDY52642	Canola	cytosol	68.84	63.25
CDX76318	Canola	cytosol	66.51	62.72
CDY65870	Canola	cytosol	63.26	62.1
CDX97157	Canola	cytosol	62.33	62.04
CDX69717	Canola	cytosol	62.33	62.04
CDX91185	Canola	cytosol	63.26	60.71
CDX87066	Canola	cytosol	52.56	59.16
CDY19786	Canola	cytosol	52.56	59.16
CDY17522	Canola	cytosol	59.07	55.46
CDY48150	Canola	mitochondrion	28.84	51.67

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:A0A078ITK2	UniProt:A0A078ITK2	EnsemblPlants:CDY52759	ProteinID:CDY52759
ProteinID:CDY52759.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00007703001	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0004EDC027

Description

BnaA07g37740DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078ITK2]

Coordinates

chrLK033124:+:64466..66893

Molecular Weight (calculated)

23500.2 Da

IEP (calculated)

5.343

GRAVY (calculated)

-0.141

Length

215 amino acids

Sequence
(BLAST)

001: MEVNTETMQK SKFGRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPN ARQIIISAPT AKELVKKLEE YSPCHERVAS
201: KLCWEIERIG YSSED

Best Arabidopsis Sequence Match ( AT3G53450.1 )
(BLAST)

001: MEVNNETMQK SKFGRICVFC GSSQGKKSSY QDAAVDLGNE LVLRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISTN ARQIIISAPT AKELVKKLEE YSPCHESVAT
201: KLCWEIERID YSSED

Arabidopsis Description

LOG4Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V9S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.