Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76318 | Canola | cytosol | 91.27 | 91.67 |
| AT4G35190.1 | Thale cress | cytosol | 84.72 | 85.09 |
| CDY52642 | Canola | cytosol | 82.97 | 81.2 |
| CDX69118 | Canola | cytosol | 77.29 | 79.02 |
| VIT_14s0036g00590.t01 | Wine grape | cytosol, extracellular | 27.07 | 77.5 |
| VIT_03s0038g03420.t01 | Wine grape | cytosol | 73.36 | 73.36 |
| VIT_18s0001g00210.t01 | Wine grape | cytosol | 69.43 | 72.6 |
| GSMUA_Achr2P03620_001 | Banana | cytosol | 63.76 | 66.67 |
| CDY13293 | Canola | cytosol | 34.06 | 66.1 |
| CDX91344 | Canola | mitochondrion | 56.33 | 64.82 |
| GSMUA_Achr1P07310_001 | Banana | cytosol, mitochondrion | 61.57 | 64.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.33 | 63.86 |
| GSMUA_Achr7P04070_001 | Banana | cytosol | 58.95 | 62.79 |
| CDY04985 | Canola | cytosol | 58.52 | 62.33 |
| CDY46763 | Canola | cytosol | 55.9 | 62.14 |
| CDX79722 | Canola | cytosol | 55.9 | 62.14 |
| CDY44352 | Canola | cytosol | 55.02 | 62.07 |
| Zm00001d021450_P001 | Maize | cytosol | 62.01 | 61.21 |
| CDY62895 | Canola | cytosol | 52.4 | 60.61 |
| CDY04551 | Canola | cytosol | 56.33 | 60.56 |
| CDX71364 | Canola | cytosol | 56.33 | 60.56 |
| CDX77168 | Canola | cytosol | 56.33 | 60.56 |
| CDY30498 | Canola | cytosol | 56.33 | 60.56 |
| EER97131 | Sorghum | cytosol | 62.01 | 60.43 |
| CDX73553 | Canola | cytosol | 51.53 | 59.9 |
| OQU88832 | Sorghum | cytosol, plastid | 58.95 | 59.21 |
| CDY52759 | Canola | cytosol | 55.46 | 59.07 |
| CDX76213 | Canola | cytosol | 51.09 | 57.92 |
| CDY30875 | Canola | cytosol | 54.15 | 57.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.14 | 56.68 |
| CDX74979 | Canola | cytosol | 55.9 | 55.9 |
| TraesCS5B01G348400.1 | Wheat | cytosol | 59.39 | 55.28 |
| CDY40411 | Canola | cytosol | 50.22 | 53.99 |
| TraesCS5D01G353600.1 | Wheat | cytosol | 58.52 | 53.82 |
| TraesCS5A01G347400.1 | Wheat | cytosol | 57.64 | 53.66 |
| TraesCS5B01G348300.1 | Wheat | cytosol | 58.08 | 53.2 |
| CDY32063 | Canola | cytosol | 49.34 | 53.05 |
| TraesCS5A01G347500.1 | Wheat | cytosol | 56.33 | 52.65 |
| CDX78180 | Canola | cytosol | 55.02 | 52.28 |
| Os09t0547500-01 | Rice | cytosol, plastid | 51.53 | 51.98 |
| CDX69717 | Canola | cytosol | 48.91 | 51.85 |
| CDX97157 | Canola | cytosol | 48.91 | 51.85 |
| TraesCS5B01G348600.1 | Wheat | cytosol | 54.15 | 51.45 |
| CDY19786 | Canola | cytosol | 42.79 | 51.31 |
| CDX87066 | Canola | cytosol | 42.79 | 51.31 |
| CDY65870 | Canola | cytosol | 47.6 | 49.77 |
| CDX79649 | Canola | cytosol | 40.17 | 49.73 |
| CDX91185 | Canola | cytosol | 48.03 | 49.11 |
| KRH32487 | Soybean | cytosol | 3.93 | 47.37 |
| CDY48150 | Canola | mitochondrion | 21.4 | 40.83 |
Protein Annotations
| MapMan:11.4.1.2 | Gene3D:3.40.50.450 | GO:A0A078FXT1 | UniProt:A0A078FXT1 | EnsemblPlants:CDY17522 | ProteinID:CDY17522 |
| ProteinID:CDY17522.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00095729001 | InterPro:LOG | InterPro:LOG_fam |
| PFAM:PF03641 | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF26 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI0004EDFCF0 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g65410DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078FXT1]
Coordinates
chrLK032074:+:579773..581584
Molecular Weight (calculated)
25354.5 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.205
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIMKSRFKR VCVFCGSSSG NRECYRDAAI DLAQELITKR LNLVYGGGSI GLMGLVSQAV HEAGCHVLGI IPRTLMDKEI TGETYGEVRA VADMHQRKAE
101: MASHSDCFIA LPDGTNPTWA QTDMIEALLG RRGLPPRVGL LNVDGYYDYL LTFIDKAVDD GFIKPSQRHI FVSAPNAKEL VQKLEAYEPV SDGTIAKSKW
201: EAEKKVQQPQ QQQQVVFCSN TSIQTEIAL
101: MASHSDCFIA LPDGTNPTWA QTDMIEALLG RRGLPPRVGL LNVDGYYDYL LTFIDKAVDD GFIKPSQRHI FVSAPNAKEL VQKLEAYEPV SDGTIAKSKW
201: EAEKKVQQPQ QQQQVVFCSN TSIQTEIAL
001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
Arabidopsis Description
LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.