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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76213 Canola cytosol 93.02 99.01
Bra039788.1-P Field mustard cytosol 76.74 98.8
CDY52759 Canola cytosol 96.28 96.28
CDY13293 Canola cytosol 52.56 95.76
AT3G53450.1 Thale cress cytosol 95.35 95.35
CDX91344 Canola mitochondrion 85.58 92.46
CDX73553 Canola cytosol 84.65 92.39
CDX79722 Canola cytosol 87.91 91.75
CDY46763 Canola cytosol 86.51 90.29
CDX78180 Canola cytosol 96.28 85.89
Solyc09g007830.2.1 Tomato cytosol 86.98 85.78
PGSC0003DMT400055525 Potato cytosol 86.98 85.78
PGSC0003DMT400027157 Potato cytosol 86.51 84.55
Solyc10g084150.1.1 Tomato cytosol 84.65 82.73
KRG95991 Soybean cytosol 84.19 82.65
GSMUA_Achr6P36490_001 Banana cytosol 83.26 82.49
KRH19875 Soybean cytosol 83.72 82.19
VIT_08s0040g01780.t01 Wine grape cytosol 83.26 82.11
KRH67693 Soybean cytosol 83.26 81.74
CDX74979 Canola cytosol 86.51 81.22
CDY30498 Canola cytosol 80.0 80.75
GSMUA_Achr1P09040_001 Banana cytosol 80.93 79.82
CDY04551 Canola cytosol 79.07 79.81
CDX71364 Canola cytosol 79.07 79.81
CDX77168 Canola cytosol 79.07 79.81
CDY44352 Canola cytosol 72.56 76.85
CDY62895 Canola cytosol 70.23 76.26
CDY04985 Canola cytosol 75.81 75.81
CDY40411 Canola cytosol 65.58 66.2
CDX69118 Canola cytosol 67.44 64.73
CDX79649 Canola cytosol 55.35 64.32
CDY32063 Canola cytosol 63.72 64.32
CDY52642 Canola cytosol 66.98 61.54
CDX76318 Canola cytosol 65.12 61.4
CDY65870 Canola cytosol 62.33 61.19
CDX97157 Canola cytosol 61.4 61.11
CDX69717 Canola cytosol 61.4 61.11
CDX91185 Canola cytosol 62.33 59.82
CDX87066 Canola cytosol 51.63 58.12
CDY19786 Canola cytosol 51.63 58.12
CDY17522 Canola cytosol 57.67 54.15
CDY48150 Canola mitochondrion 28.37 50.83
Protein Annotations
MapMan:11.4.1.2Gene3D:3.40.50.450GO:A0A078GWL0UniProt:A0A078GWL0EnsemblPlants:CDY30875ProteinID:CDY30875
ProteinID:CDY30875.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009691GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00046364001InterPro:LOGInterPro:LOG_fam
PFAM:PF03641PANTHER:PTHR31223PANTHER:PTHR31223:SF17SUPFAM:SSF102405TIGRFAMs:TIGR00730UniParc:UPI0004EB7681
Description
BnaC04g27300DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078GWL0]
Coordinates
chrLK032262:+:389647..393490
Molecular Weight (calculated)
23490.1 Da
IEP (calculated)
4.968
GRAVY (calculated)
-0.112
Length
215 amino acids
Sequence
(BLAST)
001: MEVNNDTMQK SKFERICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGI VSQVVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YSSLLSFIDK AVEEGFISPT ARQIIISAPT AKELVKKLEE YSPCHESVAS
201: KLCWEIERIG YSSED
Best Arabidopsis Sequence Match ( AT3G53450.1 )
(BLAST)
001: MEVNNETMQK SKFGRICVFC GSSQGKKSSY QDAAVDLGNE LVLRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISTN ARQIIISAPT AKELVKKLEE YSPCHESVAT
201: KLCWEIERID YSSED
Arabidopsis Description
LOG4Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V9S8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.