CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91344	Canola	mitochondrion	85.59	98.49
CDX79722	Canola	cytosol	85.15	94.66
CDY46763	Canola	cytosol	83.84	93.2
Bra017202.1-P	Field mustard	cytosol	85.15	92.86
CDY13293	Canola	cytosol	47.16	91.53
CDY52759	Canola	cytosol	82.1	87.44
CDX73553	Canola	cytosol	75.11	87.31
AT2G37210.2	Thale cress	cytosol	90.83	87.03
CDY30875	Canola	cytosol	81.22	86.51
CDX76213	Canola	cytosol	75.55	85.64
Solyc09g007830.2.1	Tomato	cytosol	80.35	84.4
PGSC0003DMT400055525	Potato	cytosol	80.35	84.4
VIT_08s0040g01780.t01	Wine grape	cytosol	79.04	83.03
Solyc10g084150.1.1	Tomato	cytosol	79.48	82.73
KRH19875	Soybean	cytosol	79.04	82.65
KRG95991	Soybean	cytosol	79.04	82.65
PGSC0003DMT400027157	Potato	cytosol	79.04	82.27
KRH67693	Soybean	cytosol	78.6	82.19
GSMUA_Achr6P36490_001	Banana	cytosol	76.86	81.11
CDY30498	Canola	cytosol	74.67	80.28
CDX77168	Canola	cytosol	74.24	79.81
CDY04551	Canola	cytosol	73.36	78.87
CDX71364	Canola	cytosol	73.36	78.87
CDY44352	Canola	cytosol	69.87	78.82
CDX78180	Canola	cytosol	82.53	78.42
CDY62895	Canola	cytosol	67.69	78.28
GSMUA_Achr1P09040_001	Banana	cytosol	74.24	77.98
CDY04985	Canola	cytosol	71.62	76.28
CDY40411	Canola	cytosol	63.32	68.08
CDY32063	Canola	cytosol	62.01	66.67
CDX69118	Canola	cytosol	65.07	66.52
CDX79649	Canola	cytosol	52.84	65.41
CDY52642	Canola	cytosol	64.63	63.25
CDX69717	Canola	cytosol	59.39	62.96
CDX97157	Canola	cytosol	59.39	62.96
CDX76318	Canola	cytosol	62.45	62.72
CDY65870	Canola	cytosol	59.39	62.1
CDX87066	Canola	cytosol	50.66	60.73
CDY19786	Canola	cytosol	50.66	60.73
CDX91185	Canola	cytosol	59.39	60.71
CDY17522	Canola	cytosol	55.9	55.9
CDY48150	Canola	mitochondrion	26.64	50.83

Protein Annotations

EnsemblPlants:CDX74979	EnsemblPlantsGene:GSBRNA2T00116994001	Gene3D:3.40.50.450	GO:A0A078CFT0	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF17	PFAM:PF03641	ProteinID:CDX74979	ProteinID:CDX74979.1	SUPFAM:SSF102405	TIGRFAMs:TIGR00730
UniParc:UPI0004EDF8BA	MapMan:11.4.1.2	:	:	:	:

Description

BnaA05g07250D

Coordinates

chrLK031802:+:1755291..1758139

Molecular Weight (calculated)

24955.1 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.083

Length

229 amino acids

Sequence
(BLAST)

001: MEITAEKMQI SRFKRICVFC GSSQGKKSSY QDAAVELGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGRS KEFGKNMISW SSCSVKATAK SGYGTLEELL EVITWAQLGI HEKPVGLLNV DGYYNSLLSF IDKAVEEGFI STTAREIIVS
201: APTAKELVKK LEEYAPCHES VASKLCWET

Best Arabidopsis Sequence Match ( AT2G37210.2 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPEEN NLVKLKNMLS WSSCSVKATL KSGYGTLEEL LEVITWAQLG IHDKPVGLLN VDGYYNSLLS FIDKAVEEGF ISPTAREIIV
201: SAPTAKELVK KLEEYAPCHE RVATKLCWEM ERIGYSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.