Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19786 | Canola | cytosol | 99.48 | 99.48 |
| CDY48150 | Canola | mitochondrion | 54.45 | 86.67 |
| Bra036562.1-P | Field mustard | cytosol | 84.29 | 83.85 |
| CDX69717 | Canola | cytosol | 83.25 | 73.61 |
| CDX97157 | Canola | cytosol | 83.25 | 73.61 |
| CDY65870 | Canola | cytosol | 82.72 | 72.15 |
| CDX91185 | Canola | cytosol | 82.2 | 70.09 |
| KRH52208 | Soybean | cytosol | 76.96 | 69.01 |
| Solyc08g062820.2.1 | Tomato | cytosol | 75.39 | 67.61 |
| PGSC0003DMT400021223 | Potato | cytosol | 74.87 | 67.14 |
| VIT_04s0008g01040.t01 | Wine grape | cytosol | 75.39 | 66.36 |
| KRH61527 | Soybean | cytosol | 77.49 | 65.78 |
| KRH05430 | Soybean | cytosol | 73.3 | 64.81 |
| GSMUA_Achr3P25920_001 | Banana | cytosol | 67.02 | 59.81 |
| CDX91344 | Canola | mitochondrion | 60.21 | 57.79 |
| AT5G26140.2 | Thale cress | cytosol | 48.17 | 56.1 |
| CDX71364 | Canola | cytosol | 61.78 | 55.4 |
| CDY30498 | Canola | cytosol | 61.78 | 55.4 |
| CDX77168 | Canola | cytosol | 61.78 | 55.4 |
| CDY04551 | Canola | cytosol | 61.26 | 54.93 |
| CDY46763 | Canola | cytosol | 59.16 | 54.85 |
| CDY44352 | Canola | cytosol | 58.12 | 54.68 |
| CDX79722 | Canola | cytosol | 58.64 | 54.37 |
| Os01t0708500-01 | Rice | mitochondrion | 63.35 | 54.26 |
| CDY62895 | Canola | cytosol | 56.02 | 54.04 |
| CDY04985 | Canola | cytosol | 60.73 | 53.95 |
| TraesCS1A01G362500.1 | Wheat | cytosol | 60.73 | 53.95 |
| TraesCS1B01G379700.1 | Wheat | cytosol | 60.73 | 53.95 |
| TraesCS1D01G367400.1 | Wheat | cytosol | 60.21 | 53.49 |
| CDX73553 | Canola | cytosol | 54.97 | 53.3 |
| TraesCS3D01G251900.1 | Wheat | cytosol | 62.83 | 53.1 |
| TraesCS3A01G251500.1 | Wheat | plastid | 63.35 | 52.84 |
| TraesCS3B01G281000.1 | Wheat | cytosol | 62.3 | 52.65 |
| CDY52759 | Canola | cytosol | 59.16 | 52.56 |
| Os05t0541200-01 | Rice | cytosol, plasma membrane | 60.73 | 52.02 |
| CDY30875 | Canola | cytosol | 58.12 | 51.63 |
| EES18588 | Sorghum | cytosol | 62.3 | 51.52 |
| GSMUA_Achr2P08480_001 | Banana | mitochondrion | 68.06 | 51.38 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 62.83 | 50.85 |
| CDX74979 | Canola | cytosol | 60.73 | 50.66 |
| CDX69118 | Canola | cytosol | 58.64 | 50.0 |
| CDX76213 | Canola | cytosol | 52.88 | 50.0 |
| Zm00001d043692_P001 | Maize | cytosol | 61.78 | 49.58 |
| CDY40411 | Canola | cytosol | 54.97 | 49.3 |
| CDX76318 | Canola | cytosol | 58.12 | 48.68 |
| CDY32063 | Canola | cytosol | 53.93 | 48.36 |
| CDY52642 | Canola | cytosol | 58.64 | 47.86 |
| CDX79649 | Canola | cytosol | 45.55 | 47.03 |
| CDX78180 | Canola | cytosol | 58.64 | 46.47 |
| CDY13293 | Canola | cytosol | 28.27 | 45.76 |
| OQU87402 | Sorghum | plastid | 62.83 | 45.63 |
| CDY17522 | Canola | cytosol | 51.31 | 42.79 |
| HORVU1Hr1G079570.13 | Barley | plastid | 55.5 | 37.32 |
| HORVU3Hr1G066810.9 | Barley | mitochondrion | 52.36 | 35.84 |
Protein Annotations
| EnsemblPlants:CDX87066 | EnsemblPlantsGene:GSBRNA2T00145954001 | Gene3D:3.40.50.450 | GO:A0A078DCS4 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF4 | PFAM:PF03641 | ProteinID:CDX87066 | ProteinID:CDX87066.1 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 |
| UniParc:UPI0004EEBEE4 | MapMan:11.4.1.2 | : | : | : | : |
Description
BnaC09g03810D
Coordinates
chrLK031849:-:256402..258011
Molecular Weight (calculated)
20807.3 Da
IEP (calculated)
6.511
GRAVY (calculated)
0.018
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENQRFKKV CVFCGSNSGH RDVFSLAAIE LGNELVKRKI DLVYGGGSVG LMGLISRRVS EGGCHVLGII PQALMPIEIS GETVGELRLS LPSLARGYGT
101: MEELLEIITW AQLGIHKKTV GLLNVDGYYN NLLALFDTGV EEGFIKPGAR NIVVSAPSAK ELLEKMELYT PSHKHIASHQ SWKVEQLAGD S
101: MEELLEIITW AQLGIHKKTV GLLNVDGYYN NLLALFDTGV EEGFIKPGAR NIVVSAPSAK ELLEKMELYT PSHKHIASHQ SWKVEQLAGD S
001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
Arabidopsis Description
LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.