Factsheet for VIT_04s0008g01040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52208	Soybean	cytosol	82.95	84.51
Bra008924.1-P	Field mustard	cytosol	79.72	80.09
CDX69717	Canola	cytosol	79.72	80.09
Solyc08g062820.2.1	Tomato	cytosol	77.88	79.34
CDX97157	Canola	cytosol	78.8	79.17
AT5G11950.1	Thale cress	cytosol	78.34	78.7
KRH05430	Soybean	cytosol	78.34	78.7
PGSC0003DMT400021223	Potato	cytosol	76.96	78.4
Bra023351.1-P	Field mustard	cytosol	78.34	78.34
KRH61527	Soybean	cytosol	81.11	78.22
CDY65870	Canola	cytosol	78.34	77.63
Bra036562.1-P	Field mustard	cytosol	67.28	76.04
GSMUA_Achr3P25920_001	Banana	cytosol	74.65	75.7
CDX87066	Canola	cytosol	66.36	75.39
CDY19786	Canola	cytosol	66.36	75.39
CDX91185	Canola	cytosol	76.5	74.11
VIT_06s0004g00590.t01	Wine grape	cytosol, mitochondrion	69.12	73.17
TraesCS3D01G251900.1	Wheat	cytosol	72.35	69.47
TraesCS3B01G281000.1	Wheat	cytosol	71.89	69.03
TraesCS3A01G251500.1	Wheat	plastid	72.81	69.0
Os01t0708500-01	Rice	mitochondrion	70.51	68.61
VIT_13s0064g00740.t01	Wine grape	cytosol	67.74	68.37
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	64.98	66.51
TraesCS1A01G362500.1	Wheat	cytosol	65.44	66.05
CDY48150	Canola	mitochondrion	36.41	65.83
VIT_08s0007g02480.t01	Wine grape	cytosol	65.44	65.74
VIT_18s0001g14030.t01	Wine grape	mitochondrion	65.44	65.74
TraesCS1B01G379700.1	Wheat	cytosol	64.98	65.58
TraesCS1D01G367400.1	Wheat	cytosol	64.52	65.12
GSMUA_Achr2P08480_001	Banana	mitochondrion	74.19	63.64
Zm00001d043692_P001	Maize	cytosol	69.59	63.45
Os05t0541200-01	Rice	cytosol, plasma membrane	64.98	63.23
VIT_08s0007g08340.t01	Wine grape	cytosol	64.06	62.61
VIT_08s0040g01780.t01	Wine grape	cytosol	62.67	62.39
EES18588	Sorghum	cytosol	65.9	61.9
Zm00001d038862_P001	Maize	cytosol, extracellular	66.36	61.02
VIT_18s0001g00210.t01	Wine grape	cytosol	61.29	60.73
VIT_03s0038g03420.t01	Wine grape	cytosol	62.67	59.39
AT5G26140.2	Thale cress	cytosol	44.7	59.15
OQU87402	Sorghum	plastid	70.51	58.17
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	18.89	51.25
HORVU3Hr1G066810.9	Barley	mitochondrion	61.75	48.03
HORVU1Hr1G079570.13	Barley	plastid	59.45	45.42

Protein Annotations

EntrezGene:100266322	wikigene:100266322	MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:A5C3Z8	EMBL:AM481401
ProteinID:CAN81797	ProteinID:CAN81797.1	ProteinID:CBI20642	ProteinID:CBI20642.3	EMBL:FN595231	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EntrezGene:LOC100266322
wikigene:LOC100266322	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF4
SUPFAM:SSF102405	TIGR:TC68976	TIGRFAMs:TIGR00730	UniParc:UPI0001524C61	ArrayExpress:VIT_04s0008g01040	EnsemblPlantsGene:VIT_04s0008g01040
EnsemblPlants:VIT_04s0008g01040.t01	unigene:Vvi.222	RefSeq:XP_002278305	RefSeq:XP_002278305.1	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A5C3Z8]

Coordinates

chr4:-:880533..883862

Molecular Weight (calculated)

23954.9 Da

IEP (calculated)

6.397

GRAVY (calculated)

-0.233

Length

217 amino acids

Sequence
(BLAST)

001: MEEKSNTRSK FKRVCVFCGS NSGNRKVFSD AALELGNELV KRKINLVYGG GSVGLMGLIS QTVYDGDCHV LGVIPRALMP LEISGQTVGE VRIVSDMHER
101: KAEMAQEADA FIALPGGYGT MEELLEMITW SQLGIHKKPV GLLNVDGYYN FLLALFDNGV KEGFIKPGAR HIVVSAPTAK ELLVKMEQYT PAHEHVASHE
201: SWQMEQQGEY PKSQNPQ

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.