Factsheet for Zm00001d043692_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0708500-01	Rice	mitochondrion	79.41	84.75
TraesCS3D01G251900.1	Wheat	cytosol	78.57	82.74
TraesCS3B01G281000.1	Wheat	cytosol	78.15	82.3
TraesCS3A01G251500.1	Wheat	plastid	78.57	81.66
OQU87402	Sorghum	plastid	88.24	79.85
GSMUA_Achr3P25920_001	Banana	cytosol	66.39	73.83
Solyc08g062820.2.1	Tomato	cytosol	62.6	69.95
Zm00001d038862_P001	Maize	cytosol, extracellular	69.33	69.92
VIT_04s0008g01040.t01	Wine grape	cytosol	63.45	69.59
PGSC0003DMT400021223	Potato	cytosol	62.18	69.48
KRH52208	Soybean	cytosol	61.76	69.01
Bra023351.1-P	Field mustard	cytosol	60.5	66.36
AT5G11950.1	Thale cress	cytosol	60.08	66.2
KRH61527	Soybean	cytosol	61.76	65.33
CDX97157	Canola	cytosol	59.24	65.28
CDX69717	Canola	cytosol	59.24	65.28
Bra008924.1-P	Field mustard	cytosol	59.24	65.28
CDY65870	Canola	cytosol	59.66	64.84
KRH05430	Soybean	cytosol	58.82	64.81
Zm00001d014016_P001	Maize	mitochondrion, nucleus	55.88	64.25
CDX91185	Canola	cytosol	59.24	62.95
GSMUA_Achr2P08480_001	Banana	mitochondrion	66.39	62.45
CDY19786	Canola	cytosol	49.58	61.78
CDX87066	Canola	cytosol	49.58	61.78
Bra036562.1-P	Field mustard	cytosol	49.58	61.46
HORVU3Hr1G066810.9	Barley	mitochondrion	67.65	57.71
Zm00001d029127_P001	Maize	mitochondrion	53.78	56.39
CDY48150	Canola	mitochondrion	27.73	55.0
Zm00001d003013_P001	Maize	cytosol	56.3	53.82
Zm00001d021450_P001	Maize	cytosol	51.26	52.59
Zm00001d025868_P002	Maize	cytosol	55.04	51.78
AT5G26140.2	Thale cress	cytosol	35.29	51.22
Zm00001d011246_P002	Maize	cytosol	54.62	50.98
Zm00001d033605_P001	Maize	cytosol	50.42	50.42
Zm00001d039174_P001	Maize	plastid	52.94	47.55
Zm00001d044327_P001	Maize	plastid	37.4	34.5

Protein Annotations

EntrezGene:100275503	MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:A0A1D6NEC0	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	ProteinID:ONM38833.1
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF4	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	TMHMM:TMhelix
UniParc:UPI0008438E22	EnsemblPlantsGene:Zm00001d043692	EnsemblPlants:Zm00001d043692_P001	EnsemblPlants:Zm00001d043692_T001	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8

Coordinates

chr3:+:207545558..207548378

Molecular Weight (calculated)

25397.0 Da

IEP (calculated)

4.930

GRAVY (calculated)

0.198

Length

238 amino acids

Sequence
(BLAST)

001: MGDSAAGAPE PSRFGRICVF CGSNPGNRAV YGDAALDLGK ELVAKGIDLV YGGGSVGLMG LIAQTVLGGG CSVLGVIPRA LMPLEVCIKI INCPFLLFSS
101: LCVPLISGAS VGEVKVVSDM HERKAEMARQ ADAFIALPGG YGTMEELLEM ITWSQLGIHD KPVGLLNVDG YYDPLLMLFD RGATEGFIKL DCRDIIVSAP
201: TAHELLKKME HYTRSHQEVA PRTSWEMSEL GYGKASES

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.