Factsheet for Solyc08g062820.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021223	Potato	cytosol	98.12	98.12
KRH52208	Soybean	cytosol	78.87	78.87
Bra023351.1-P	Field mustard	cytosol	79.34	77.88
VIT_04s0008g01040.t01	Wine grape	cytosol	79.34	77.88
AT5G11950.1	Thale cress	cytosol	78.87	77.78
CDY65870	Canola	cytosol	78.87	76.71
KRH05430	Soybean	cytosol	76.53	75.46
CDX87066	Canola	cytosol	67.61	75.39
CDY19786	Canola	cytosol	67.61	75.39
Bra008924.1-P	Field mustard	cytosol	76.06	75.0
Bra036562.1-P	Field mustard	cytosol	67.61	75.0
CDX69717	Canola	cytosol	76.06	75.0
CDX97157	Canola	cytosol	76.06	75.0
CDX91185	Canola	cytosol	77.46	73.66
GSMUA_Achr3P25920_001	Banana	cytosol	73.71	73.36
KRH61527	Soybean	cytosol	76.53	72.44
Solyc01g005680.2.1	Tomato	mitochondrion	68.08	71.08
Os01t0708500-01	Rice	mitochondrion	70.89	67.71
Solyc06g075090.2.1	Tomato	cytosol	60.09	67.02
TraesCS3D01G251900.1	Wheat	cytosol	69.01	65.04
TraesCS3A01G251500.1	Wheat	plastid	69.48	64.63
TraesCS3B01G281000.1	Wheat	cytosol	68.54	64.6
CDY48150	Canola	mitochondrion	36.15	64.17
TraesCS1A01G362500.1	Wheat	cytosol	64.32	63.72
Solyc01g007270.1.1	Tomato	cytosol	20.66	62.86
GSMUA_Achr2P08480_001	Banana	mitochondrion	74.65	62.85
TraesCS1B01G379700.1	Wheat	cytosol	63.38	62.79
TraesCS1D01G367400.1	Wheat	cytosol	63.38	62.79
Solyc04g081290.2.1	Tomato	cytosol	66.2	62.67
Zm00001d043692_P001	Maize	cytosol	69.95	62.6
Solyc09g007830.2.1	Tomato	cytosol	63.38	61.93
Os05t0541200-01	Rice	cytosol, plasma membrane	64.79	61.88
Solyc10g084150.1.1	Tomato	cytosol	63.85	61.82
EES18588	Sorghum	cytosol	66.67	61.47
Solyc10g082020.1.1	Tomato	cytosol	61.5	60.37
Zm00001d038862_P001	Maize	cytosol, extracellular	65.26	58.9
Solyc11g069570.1.1	Tomato	cytosol	64.32	58.55
AT5G26140.2	Thale cress	cytosol	44.6	57.93
OQU87402	Sorghum	plastid	70.42	57.03
HORVU3Hr1G066810.9	Barley	mitochondrion	60.09	45.88
HORVU1Hr1G079570.13	Barley	plastid	59.15	44.37

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691
GO:GO:0009987	GO:GO:0016787	UniProt:K4CL66	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF4	SUPFAM:SSF102405	EnsemblPlantsGene:Solyc08g062820.2	EnsemblPlants:Solyc08g062820.2.1	TIGRFAMs:TIGR00730
UniParc:UPI000276B2BD	:	:	:	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:K4CL66]

Coordinates

chr8:-:52137864..52140561

Molecular Weight (calculated)

23176.9 Da

IEP (calculated)

5.563

GRAVY (calculated)

-0.119

Length

213 amino acids

Sequence
(BLAST)

001: MESNSRSKFK KICVFCGSNP GHRKVFSDAA IDLGNELVSR KIDLVYGGGS VGLMGLISQR VQEGGCHVLG VIPKALVPIE ISGESVGDVK IVSDMHERKA
101: EMAIQADAFI ALPGGYGTME ETLEMITWAQ LGIHKKPVGL LNVEGYYNSL LALFDNGVEE GFIKPGARDI VLAAPSAREL LSKMEQYTPS HDHVAPHESW
201: HMEELAYPKE QSP

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.