Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g01040.t01 | Wine grape | cytosol | 75.7 | 74.65 |
| GSMUA_Achr2P08480_001 | Banana | mitochondrion | 87.85 | 74.31 |
| KRH52208 | Soybean | cytosol | 73.36 | 73.71 |
| Solyc08g062820.2.1 | Tomato | cytosol | 73.36 | 73.71 |
| PGSC0003DMT400021223 | Potato | cytosol | 72.9 | 73.24 |
| Bra023351.1-P | Field mustard | cytosol | 71.5 | 70.51 |
| TraesCS3D01G251900.1 | Wheat | cytosol | 74.3 | 70.35 |
| TraesCS3A01G251500.1 | Wheat | plastid | 75.23 | 70.31 |
| KRH61527 | Soybean | cytosol | 73.83 | 70.22 |
| Os01t0708500-01 | Rice | mitochondrion | 72.9 | 69.96 |
| TraesCS3B01G281000.1 | Wheat | cytosol | 73.83 | 69.91 |
| AT5G11950.1 | Thale cress | cytosol | 70.56 | 69.91 |
| KRH05430 | Soybean | cytosol | 70.56 | 69.91 |
| TraesCS1B01G379700.1 | Wheat | cytosol | 70.09 | 69.77 |
| TraesCS1A01G362500.1 | Wheat | cytosol | 69.63 | 69.3 |
| Bra036562.1-P | Field mustard | cytosol | 62.15 | 69.27 |
| CDX97157 | Canola | cytosol | 69.63 | 68.98 |
| CDX69717 | Canola | cytosol | 69.63 | 68.98 |
| Bra008924.1-P | Field mustard | cytosol | 69.63 | 68.98 |
| CDY65870 | Canola | cytosol | 70.56 | 68.95 |
| TraesCS1D01G367400.1 | Wheat | cytosol | 69.16 | 68.84 |
| Os05t0541200-01 | Rice | cytosol, plasma membrane | 70.09 | 67.26 |
| CDY19786 | Canola | cytosol | 59.81 | 67.02 |
| CDX87066 | Canola | cytosol | 59.81 | 67.02 |
| CDX91185 | Canola | cytosol | 70.09 | 66.96 |
| Zm00001d043692_P001 | Maize | cytosol | 73.83 | 66.39 |
| GSMUA_Achr3P29740_001 | Banana | cytosol, plastid | 60.28 | 65.15 |
| EES18588 | Sorghum | cytosol | 70.09 | 64.94 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 59.35 | 64.47 |
| GSMUA_Achr1P09040_001 | Banana | cytosol | 64.95 | 63.76 |
| GSMUA_Achr6P36490_001 | Banana | cytosol | 64.49 | 63.59 |
| GSMUA_Achr8P31460_001 | Banana | cytosol | 61.22 | 62.09 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 68.22 | 61.86 |
| OQU87402 | Sorghum | plastid | 74.77 | 60.84 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 62.15 | 60.73 |
| GSMUA_Achr8P19190_001 | Banana | cytosol | 63.55 | 60.71 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 43.93 | 60.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.07 | 59.41 |
| GSMUA_Achr1P07310_001 | Banana | cytosol, mitochondrion | 57.94 | 56.62 |
| GSMUA_Achr2P03620_001 | Banana | cytosol | 57.01 | 55.71 |
| GSMUA_Achr8P04060_001 | Banana | cytosol | 58.41 | 55.31 |
| GSMUA_Achr2P00980_001 | Banana | cytosol | 63.55 | 55.06 |
| GSMUA_Achr2P08380_001 | Banana | cytosol | 58.88 | 55.02 |
| CDY48150 | Canola | mitochondrion | 30.84 | 55.0 |
| GSMUA_Achr7P04070_001 | Banana | cytosol | 55.14 | 54.88 |
| GSMUA_Achr4P03590_001 | Banana | plastid | 63.08 | 54.66 |
| AT5G26140.2 | Thale cress | cytosol | 40.65 | 53.05 |
| GSMUA_Achr6P35930_001 | Banana | cytosol | 52.34 | 50.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.48 | 49.8 |
| HORVU3Hr1G066810.9 | Barley | mitochondrion | 62.62 | 48.03 |
| HORVU1Hr1G079570.13 | Barley | plastid | 62.62 | 47.18 |
Protein Annotations
| MapMan:11.4.1.2 | Gene3D:3.40.50.450 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr3G25920_001 | EnsemblPlants:GSMUA_Achr3P25920_001 |
| EnsemblPlants:GSMUA_Achr3T25920_001 | InterPro:LOG | InterPro:LOG_fam | UniProt:M0SHV8 | PFAM:PF03641 | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF4 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI0002964E06 | : | : |
Description
Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G25920_001]
Coordinates
chr3:+:25946041..25948415
Molecular Weight (calculated)
23377.3 Da
IEP (calculated)
5.938
GRAVY (calculated)
-0.061
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDETRSKFK RICVFCGSNS GNRTVFSDAA LDLGRELVRR RIDLVYGGGS VGLMGLISRA VYDGGCHVLG VIPQALMPLE ISGETVGQVK IVSDMHERKA
101: LMAQQADAFI ALPGGYGTME EVMEMTTWSQ LGIHDKPVGL LNVDGYYNSL LELFDNGVQE GFIKPACRHI VLSASTADEL LTKMELYTPL HKEVAPRQNW
201: EISHLGYSKA PSSP
101: LMAQQADAFI ALPGGYGTME EVMEMTTWSQ LGIHDKPVGL LNVDGYYNSL LELFDNGVQE GFIKPACRHI VLSASTADEL LTKMELYTPL HKEVAPRQNW
201: EISHLGYSKA PSSP
001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
Arabidopsis Description
LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.