Factsheet for GSMUA_Achr11P00800_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 4
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19190_001	Banana	cytosol	88.58	86.61
VIT_18s0001g14030.t01	Wine grape	mitochondrion	80.37	81.48
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	57.08	80.65
Solyc04g081290.2.1	Tomato	cytosol	82.19	80.0
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	82.19	80.0
KRH05931	Soybean	cytosol	76.71	78.14
GSMUA_Achr2P00980_001	Banana	cytosol	86.76	76.92
KRH17410	Soybean	cytosol	74.43	76.53
GSMUA_Achr6P36490_001	Banana	cytosol	75.34	76.04
KRH51716	Soybean	cytosol	76.26	75.57
GSMUA_Achr1P09040_001	Banana	cytosol	73.06	73.39
KRH61054	Soybean	cytosol	75.34	73.33
GSMUA_AchrUn_...	Banana	cytosol	64.84	70.3
AT2G35990.1	Thale cress	cytosol	67.12	69.01
CDY40411	Canola	cytosol	66.67	68.54
Bra017270.1-P	Field mustard	cytosol	66.67	68.54
GSMUA_Achr7P04070_001	Banana	cytosol	66.67	67.91
CDY32063	Canola	cytosol	65.3	67.14
CDX79649	Canola	cytosol	56.62	67.03
GSMUA_Achr2P03620_001	Banana	cytosol	66.67	66.67
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	66.67	66.67
GSMUA_Achr8P04060_001	Banana	cytosol	68.04	65.93
GSMUA_Achr2P08380_001	Banana	cytosol	68.49	65.5
Os03t0857900-02	Rice	nucleus	71.23	63.41
GSMUA_Achr3P25920_001	Banana	cytosol	60.73	62.15
TraesCS5D01G568400.1	Wheat	plastid	66.67	62.13
TraesCS4A01G318100.1	Wheat	plastid	70.32	62.1
TraesCS5D01G568500.1	Wheat	cytosol	69.86	61.69
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	55.25	61.42
HORVU5Hr1G124750.1	Barley	cytosol	69.41	61.29
TraesCS5B01G561300.1	Wheat	plastid	69.86	61.2
TraesCS4A01G317900.1	Wheat	plastid	68.04	60.82
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	54.79	60.61
GSMUA_Achr6P35930_001	Banana	cytosol	61.19	60.09
TraesCS5B01G561400.1	Wheat	plastid	67.58	59.92
GSMUA_AchrUn_...	Banana	cytosol	67.12	59.51
GSMUA_Achr8P31460_001	Banana	cytosol	52.51	54.5
GSMUA_Achr2P08480_001	Banana	mitochondrion	61.19	52.96
EER93059	Sorghum	cytosol	42.47	51.1
GSMUA_Achr4P03590_001	Banana	plastid	55.25	48.99

Protein Annotations

EnsemblPlants:GSMUA_Achr11P00800_001	EnsemblPlants:GSMUA_Achr11T00800_001	EnsemblPlantsGene:GSMUA_Achr11G00800_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF19	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0002958F5A	UniProt:M0RNB1	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G00800_001]

Coordinates

chr11:+:492329..493709

Molecular Weight (calculated)

23657.7 Da

IEP (calculated)

6.961

GRAVY (calculated)

-0.054

Length

219 amino acids

Sequence
(BLAST)

001: METEAQALPM TKRPSSTSRF RRVCVFCGSS PGKKASYQLA AIQLGHELVQ RNIDLVYGGG SVGLMGLVSQ AVHEGGRHVL GVIPRTLMPR EITGETVGEV
101: RAVSGMHQRK AEMARQADAF IALPGGYGTL EELLEVITWA QLGIHDKPVG LLNVDGYYDS LLSFIDKAVD EGFITPTARR IIVSAQTAHE LLSKLEDYAP
201: MHGGVAPELG HSPKLEIAR

Best Arabidopsis Sequence Match ( AT3G53450.1 )
(BLAST)

001: MEVNNETMQK SKFGRICVFC GSSQGKKSSY QDAAVDLGNE LVLRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISTN ARQIIISAPT AKELVKKLEE YSPCHESVAT
201: KLCWEIERID YSSED

Arabidopsis Description

LOG4Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V9S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.