Factsheet for TraesCS5B01G561300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G568500.1	Wheat	cytosol	97.2	97.98
HORVU5Hr1G124750.1	Barley	cytosol	96.4	97.18
TraesCS4A01G318100.1	Wheat	plastid	94.8	95.56
TraesCS5B01G561400.1	Wheat	plastid	86.8	87.85
VIT_18s0001g14030.t01	Wine grape	mitochondrion	62.0	71.76
Os03t0857900-02	Rice	nucleus	69.2	70.33
GSMUA_Achr8P19190_001	Banana	cytosol	62.8	70.09
GSMUA_Achr11P...	Banana	cytosol, plastid	61.2	69.86
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	42.4	68.39
KRH51716	Soybean	cytosol	60.0	67.87
Solyc04g081290.2.1	Tomato	cytosol	60.4	67.11
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	60.4	67.11
CDY40411	Canola	cytosol	56.8	66.67
KRH05931	Soybean	cytosol	57.2	66.51
Bra017270.1-P	Field mustard	cytosol	56.4	66.2
KRH61054	Soybean	cytosol	59.2	65.78
CDY32063	Canola	cytosol	56.0	65.73
AT2G35990.1	Thale cress	cytosol	56.0	65.73
TraesCS1B01G173200.1	Wheat	mitochondrion	54.4	65.38
TraesCS4B01G250400.1	Wheat	mitochondrion	53.2	64.88
KRH17410	Soybean	cytosol	55.2	64.79
TraesCS4B01G313800.1	Wheat	mitochondrion	52.8	64.39
CDX79649	Canola	cytosol	46.8	63.24
GSMUA_Achr2P00980_001	Banana	cytosol	62.0	62.75
TraesCS1B01G379700.1	Wheat	cytosol	49.6	57.67
TraesCS3B01G241600.1	Wheat	cytosol	54.8	57.32
EER93059	Sorghum	cytosol	40.4	55.49
TraesCS5B01G348300.1	Wheat	cytosol	54.8	54.8
TraesCS5B01G348600.1	Wheat	cytosol	52.8	54.77
TraesCS5B01G348400.1	Wheat	cytosol	53.6	54.47
TraesCS3B01G281000.1	Wheat	cytosol	48.8	53.98
TraesCS4B01G035700.1	Wheat	cytosol	48.0	53.1
TraesCS1B01G471300.1	Wheat	cytosol, plastid	56.4	52.61
TraesCS2B01G397600.2	Wheat	cytosol	58.8	52.5

Protein Annotations

EnsemblPlants:TraesCS5B01G561300.1	EnsemblPlantsGene:TraesCS5B01G561300	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF27	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5B:+:707439980..707440732

Molecular Weight (calculated)

26476.7 Da

IEP (calculated)

6.136

GRAVY (calculated)

-0.116

Length

250 amino acids

Sequence
(BLAST)

001: MEQQEEAPTS TTMTVSLATS PKPAPASNGS KKQLPSRFRR VCVFCGSSPG RKPAYQLAAV QLGQQLVERG IDLVYGGGSV GLMGLVSRAV HGGGGRVTGV
101: VPRSVLPREL IGETPGGEEV KAVSGMHQRK AEMARRADAF VALPGGYGTL EELLEVITWA QLGIHDKPVG LLNVEGYYDS LLDFIDRAVD EGFVSPAARR
201: IIVAAPTPGE LLAALEEYAP AHQDASAIKL SWESSVDTMA CSPPRPDISR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.