Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40411 | Canola | cytosol | 91.35 | 79.34 |
| AT2G35990.1 | Thale cress | cytosol | 90.81 | 78.87 |
| CDY32063 | Canola | cytosol | 89.73 | 77.93 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 50.81 | 60.65 |
| CDY04985 | Canola | cytosol | 70.27 | 60.47 |
| CDX91344 | Canola | mitochondrion | 64.86 | 60.3 |
| VIT_18s0001g14030.t01 | Wine grape | mitochondrion | 68.11 | 58.33 |
| KRH05931 | Soybean | cytosol | 67.03 | 57.67 |
| CDX79722 | Canola | cytosol | 63.78 | 57.28 |
| KRH17410 | Soybean | cytosol | 65.41 | 56.81 |
| CDY46763 | Canola | cytosol | 63.24 | 56.8 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 67.03 | 56.62 |
| CDX73553 | Canola | cytosol | 60.0 | 56.35 |
| CDY52759 | Canola | cytosol | 64.86 | 55.81 |
| KRH51716 | Soybean | cytosol | 66.49 | 55.66 |
| Solyc04g081290.2.1 | Tomato | cytosol | 67.57 | 55.56 |
| PGSC0003DMT400009551 | Potato | cytosol, mitochondrion, plastid | 67.57 | 55.56 |
| CDY62895 | Canola | cytosol | 59.46 | 55.56 |
| CDY30875 | Canola | cytosol | 64.32 | 55.35 |
| CDY44352 | Canola | cytosol | 60.54 | 55.17 |
| CDX77168 | Canola | cytosol | 63.24 | 54.93 |
| CDY30498 | Canola | cytosol | 63.24 | 54.93 |
| GSMUA_Achr8P19190_001 | Banana | cytosol | 66.49 | 54.91 |
| KRH61054 | Soybean | cytosol | 66.49 | 54.67 |
| CDX71364 | Canola | cytosol | 62.7 | 54.46 |
| CDY04551 | Canola | cytosol | 62.16 | 53.99 |
| CDX76213 | Canola | cytosol | 57.84 | 52.97 |
| CDX74979 | Canola | cytosol | 65.41 | 52.84 |
| CDY13293 | Canola | cytosol | 32.43 | 50.85 |
| CDX78180 | Canola | cytosol | 64.32 | 49.38 |
| GSMUA_Achr2P00980_001 | Banana | cytosol | 65.41 | 48.99 |
| CDX69118 | Canola | cytosol | 58.92 | 48.66 |
| TraesCS5D01G568500.1 | Wheat | cytosol | 63.24 | 47.18 |
| Os03t0857900-02 | Rice | nucleus | 62.7 | 47.15 |
| CDY65870 | Canola | cytosol | 55.68 | 47.03 |
| TraesCS4A01G317900.1 | Wheat | plastid | 62.16 | 46.94 |
| TraesCS5D01G568400.1 | Wheat | plastid | 59.46 | 46.81 |
| TraesCS5B01G561300.1 | Wheat | plastid | 63.24 | 46.8 |
| HORVU5Hr1G124750.1 | Barley | cytosol | 62.7 | 46.77 |
| TraesCS4A01G318100.1 | Wheat | plastid | 62.7 | 46.77 |
| CDX69717 | Canola | cytosol | 54.59 | 46.76 |
| CDX97157 | Canola | cytosol | 54.59 | 46.76 |
| CDX76318 | Canola | cytosol | 57.3 | 46.49 |
| TraesCS5B01G561400.1 | Wheat | plastid | 61.62 | 46.15 |
| CDY52642 | Canola | cytosol | 57.84 | 45.73 |
| CDY19786 | Canola | cytosol | 47.03 | 45.55 |
| CDX87066 | Canola | cytosol | 47.03 | 45.55 |
| CDX91185 | Canola | cytosol | 55.14 | 45.54 |
| EER93059 | Sorghum | cytosol | 42.7 | 43.41 |
| CDY48150 | Canola | mitochondrion | 27.03 | 41.67 |
| CDY17522 | Canola | cytosol | 49.73 | 40.17 |
Protein Annotations
| EnsemblPlants:CDX79649 | EnsemblPlantsGene:GSBRNA2T00132440001 | Gene3D:3.40.50.450 | GO:A0A078CUG9 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF24 | PFAM:PF03641 | ProteinID:CDX79649 | ProteinID:CDX79649.1 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 |
| UniParc:UPI0004EE1C8C | MapMan:11.4.1.2 | : | : | : | : |
Description
BnaC03g19850D
Coordinates
chrLK031818:+:1385751..1387853
Molecular Weight (calculated)
19962.0 Da
IEP (calculated)
4.690
GRAVY (calculated)
0.067
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKTPPCLV ERNIDLVYGG GSVGLMGLIS QAVHDGGRHV LGIIPKSLAP REITGDSIGE VITVSTMHQR KTEMGRQADA FIALPGGYGT FEELLEVITW
101: SQLGIHTKPV GLLNVDGFYD SLLTFIDKAV DEGFVSSTAR RIIVSARTAP QLLQLLEYVP KHDDFVSKMV WDDISDAATS EGDSC
101: SQLGIHTKPV GLLNVDGFYD SLLTFIDKAV DEGFVSSTAR RIIVSARTAP QLLQLLEYVP KHDDFVSKMV WDDISDAATS EGDSC
001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF
Arabidopsis Description
LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.