Factsheet for Os03t0857900-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g14030.t01	Wine grape	mitochondrion	64.63	73.61
Os10t0479500-01	Rice	mitochondrion	59.35	71.57
TraesCS5D01G568400.1	Wheat	plastid	68.29	71.49
TraesCS5B01G561400.1	Wheat	plastid	71.54	71.26
GSMUA_Achr11P...	Banana	cytosol, plastid	63.41	71.23
TraesCS4A01G317900.1	Wheat	plastid	70.33	70.61
TraesCS5D01G568500.1	Wheat	cytosol	70.73	70.16
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	63.82	69.78
Solyc04g081290.2.1	Tomato	cytosol	63.82	69.78
HORVU5Hr1G124750.1	Barley	cytosol	70.33	69.76
TraesCS5B01G561300.1	Wheat	plastid	70.33	69.2
TraesCS4A01G318100.1	Wheat	plastid	69.51	68.95
KRH51716	Soybean	cytosol	61.79	68.78
GSMUA_Achr8P19190_001	Banana	cytosol	62.6	68.75
Os03t0109300-01	Rice	mitochondrion	58.94	68.72
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	43.09	68.39
KRH05931	Soybean	cytosol	59.35	67.91
KRH61054	Soybean	cytosol	61.79	67.56
KRH17410	Soybean	cytosol	57.72	66.67
CDY40411	Canola	cytosol	57.72	66.67
Bra017270.1-P	Field mustard	cytosol	57.32	66.2
AT2G35990.1	Thale cress	cytosol	57.32	66.2
CDY32063	Canola	cytosol	56.91	65.73
GSMUA_Achr2P00980_001	Banana	cytosol	63.82	63.56
CDX79649	Canola	cytosol	47.15	62.7
Os02t0628000-00	Rice	cytosol	60.16	60.66
EER93059	Sorghum	cytosol	44.31	59.89
Os01t0588900-01	Rice	cytosol	58.54	59.5
Os04t0518800-01	Rice	cytosol	59.76	58.8
Os09t0547500-01	Rice	cytosol, plastid	53.66	58.15
Os01t0708500-01	Rice	mitochondrion	50.81	56.05
Os05t0541200-01	Rice	cytosol, plasma membrane	49.19	54.26
Os05t0591600-01	Rice	cytosol	57.32	53.01
Os03t0697200-00	Rice	nucleus	33.74	34.16

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:4334848	ProteinID:AAP21384.1	ProteinID:ABF99999.1	EMBL:AK061341
EMBL:AK071705	EMBL:AK104022	ProteinID:BAF13872.1	ProteinID:BAS87462.1	ProteinID:EAZ39375.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	EnsemblPlantsGene:Os03g0857900	EnsemblPlants:Os03t0857900-02	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF27	UniProt:Q84M85	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0000190999
RefSeq:XP_015628468.1	SEG:seg	:	:	:	:

Description

LONELY GUY LIKE PHOSPHORIBOHYDROLASE 5Similar to Lysine decarboxylase-like protein. (Os03t0857900-02);Similar to Lysine decarboxylase-like protein. (Os03t0857900-04)

Coordinates

chr3:+:36203964..36205153

Molecular Weight (calculated)

26586.2 Da

IEP (calculated)

9.080

GRAVY (calculated)

-0.210

Length

246 amino acids

Sequence
(BLAST)

001: MMMENSREQQ PESSPANNNS KKKKKKKTAS RFRRVCVFCG SSPGKKASYQ VAAVQLGQQL VERGIDLVYG GGSVGLMGLV SRAVHGGGGH VVGVVPNGVL
101: PRELIGETLG EVRAVGSMHQ RKAEMARESD AFIALPGGYG TLEELLEVIT WAQLRIHHKP VGLLNVDGYY DSLLAFIDKA VHEGFVSPPA RRIIVAAPTA
201: SDLLCKLEEY VPPPHDATAL KLTWEMSTVS EQHAGSIYSP KPDMAR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.