Factsheet for TraesCS4A01G318100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G124750.1	Barley	cytosol	95.97	95.97
TraesCS5D01G568500.1	Wheat	cytosol	95.16	95.16
TraesCS5B01G561300.1	Wheat	plastid	95.56	94.8
TraesCS4A01G317900.1	Wheat	plastid	87.5	88.57
VIT_18s0001g14030.t01	Wine grape	mitochondrion	62.5	71.76
GSMUA_Achr8P19190_001	Banana	cytosol	64.11	70.98
GSMUA_Achr11P...	Banana	cytosol, plastid	62.1	70.32
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	43.55	69.68
Os03t0857900-02	Rice	nucleus	68.95	69.51
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	61.69	68.0
Solyc04g081290.2.1	Tomato	cytosol	61.69	68.0
KRH51716	Soybean	cytosol	60.08	67.42
CDY40411	Canola	cytosol	56.85	66.2
KRH05931	Soybean	cytosol	57.26	66.05
Bra017270.1-P	Field mustard	cytosol	56.45	65.73
KRH61054	Soybean	cytosol	59.27	65.33
AT2G35990.1	Thale cress	cytosol	56.05	65.26
CDY32063	Canola	cytosol	56.05	65.26
TraesCS4A01G054500.1	Wheat	mitochondrion	17.74	64.71
TraesCS1A01G156100.1	Wheat	mitochondrion	54.03	64.42
KRH17410	Soybean	cytosol	55.24	64.32
TraesCS4A01G413200.1	Wheat	mitochondrion	52.82	63.59
GSMUA_Achr2P00980_001	Banana	cytosol	62.9	63.16
CDX79649	Canola	cytosol	46.77	62.7
TraesCS2A01G380600.1	Wheat	cytosol	59.68	60.16
TraesCS3A01G211100.1	Wheat	cytosol	54.44	57.69
TraesCS1A01G362500.1	Wheat	cytosol	49.6	57.21
EER93059	Sorghum	cytosol	40.32	54.95
TraesCS5A01G347500.1	Wheat	cytosol	53.23	53.88
TraesCS5A01G347400.1	Wheat	cytosol	53.23	53.66
TraesCS4A01G277200.1	Wheat	cytosol	47.98	53.6
TraesCS3A01G251500.1	Wheat	plastid	49.19	53.28

Protein Annotations

EnsemblPlants:TraesCS4A01G318100.1	EnsemblPlantsGene:TraesCS4A01G318100	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF27	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr4A:-:607261315..607262061

Molecular Weight (calculated)

26113.3 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.105

Length

248 amino acids

Sequence
(BLAST)

001: MEQLEEAPTS TTTVALATSP KPAPSSNGSK KLPSRFRRVC VFCGSSPGRK PAYQLAAVQL GQQLVERGID LVYGGGSVGL MGLVSRAVHG GGGRVTGVVP
101: RSVLPRELIG ETPGGEEVKA VSGMHQRKAE MARRADAFVA LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVEGYYDSLL DFIDRAVDEG FVSPAARRII
201: VAAPTPGELL AALEDYSPAH HDGGGVKLSW ESSVDTMACS PPKPDISR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.